Tomato pathogenesis-related genes

T1079: Pseudomonas susceptible leaf library
T1080: Pseudomonas resistant leaf library
T1297: mixed elicitor-induced leaf library

TCT1079T1080T1297p valuePutative functionE value
TC115911728120sp|P04284|PR06_LYCES Pathogenesis-related leaf protein 6 precursor (P6) (Ethylene-induced protein P1) (P14) (P14A) (PR protein)9e-094
TC12375358972960sp|P07179|RBS2_LYCES Ribulose bisphosphate carboxylase small chain 2A, chloroplast precursor (RuBisCO small subunit 2A) (LESS 5)1e-096
TC12377315100dbj|BAA09709.1| elongation factor-1 alpha [Nicotiana tabacum] 0.0
TC116084110381.80E-05ref|NP_180615.1| photosystem II reaction center 6.1KD protein [Arabidopsis thaliana]4e-027
TC11578531351233.00E-06sp|Q40163|PSBR_LYCES Photosystem II 10 kDa polypeptide, chloroplast precursor9e-066
TC1237331219753.00E-06sp|P07180|RBS3_LYCES Ribulose bisphosphate carboxylase small chain 3A/3C, chloroplast precursor (RuBisCO small subunit 3A/3C)2e-096
TC11590820764.30E-05gb|AAM92008.1|AF527779_1 glyceraldehyde 3-phosphate dehydrogenase [Solanum tuberosum] e-170
TC12420255360.00011emb|CAB16914.1| H-Protein precursor [Flaveria pringlei] 1e-073
TC1256738010.00014gb|AAD18029.1| lipid transfer protein LTP1 precursor [Capsicum annuum] 3e-053
TC1165420600.00022sp|Q9LW96|INO1_TOBAC Inositol-3-phosphate synthase (Myo-inositol-1-phosphate synthase) (MI-1-P synthase) (IPS)0.0
TC1237091391823550.00047sp|P07180|RBS3_LYCES Ribulose bisphosphate carboxylase small chain 3A/3C, chloroplast precursor (RuBisCO small subunit 3A/3C)6e-097
TC1244757100.00048pir||S44365 1,3-beta-glucanase (EC 3.2.1.-), basic - tomatoe-172
TC1243687100.00048pir||T01984 late-embryogenesis protein lea5 - common tobacco9e-021
TC1247097010.00054sp|Q9XF97|RL4_PRUAR 60S ribosomal protein L4 (L1)e-170
TC1244427010.00054ref|NP_196816.1| peptidyl-prolyl isomerase protein [Arabidopsis thaliana]1e-077
TC1238982633210.00054No hits found
TC12376110040.00055gb|AAD15343.1| similar to PHZF, catalyzing the hydroxylation of phenazine-1-carboxylic acid to 2-hydroxy-phenazine-1-carboxylic acid [Arabidopsis thaliana]6e-091
TC12375103190.00067emb|CAC44012.1| snakin2 [Solanum tuberosum] 8e-049
TC11578222210.00097emb|CAD13177.1| alpha-tubulin [Nicotiana tabacum] 0.0
TC1158553235260.00108sp|P08706|RBS1_LYCES Ribulose bisphosphate carboxylase small chain 1, chloroplast precursor (RuBisCO small subunit 1) (LESS17)5e-095
TC1168365000.00111ref|NP_566107.1| putative small nuclear ribonucleoprotein D2 [Arabidopsis thaliana]6e-044
TC1171095000.00111sp|P49215|RS17_LYCES 40S ribosomal protein S174e-068
TC115845203350.00124sp|P43349|TCTP_SOLTU TRANSLATIONALLY CONTROLLED TUMOR PROTEIN HOMOLOG (TCTP) (P23)1e-082
TC1167506100.00176gb|AAO34704.1| ethylene response factor 2 [Lycopersicon esculentum] e-137
TC1157666100.00176ref|NP_563807.1| dihydroflavonol reductase -related [Arabidopsis thaliana]0.0
TC1169390720.00178ref|NP_189221.1| 50S ribosomal protein L15, chloroplast precursor [Arabidopsis thaliana]4e-082
TC12414812530.00192sp|P32111|GTX1_SOLTU Probable glutathione S-transferase (Pathogenesis-related protein 1)e-105
TC11614901130.00241dbj|BAC66487.1| translation-inhibitor protein [Gentiana triflora] 1e-050
TC123879121240.00256sp|Q04694|DCAM_SOLTU S-adenosylmethionine decarboxylase proenzyme (AdoMetDC) (SamDC) (Induced stolen tip protein TUB13) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain]0.0
TC1240017110.00258pir||T04316 heat shock protein MTSHP precursor, mitochondrial - tomato2e-078
TC11628045270.0031No hits found
TC12379481450.0033sp|P07370|CB2B_LYCES Chlorophyll A-B binding protein 1B, chloroplast precursor (LHCII type I CAB-1B) (LHCP)e-141
TC1165070400.00366pdb|1CBG| Cyanogenic Beta-Glucosidase Mol_id: 1; Molecule: Cyanogenic Beta-Glucosidase; Chain: Null; Ec: 3.2.1.21 e-159
TC1272300400.00366No hits found
TC1248524000.00433ref|NP_566709.1| hydroxyproline-rich glycoprotein family [Arabidopsis thaliana]e-165
TC1174634000.00433sp|Q04108|PR04_LYCES Pathogenesis-related leaf protein 4 precursor (P4)2e-094
TC1241504000.00433sp|P32111|GTX1_SOLTU Probable glutathione S-transferase (Pathogenesis-related protein 1)3e-079
TC1270274000.00433ref|NP_200682.1| putative protein [Arabidopsis thaliana]2e-080
TC1238078310.00434sp|P46300|RS4_SOLTU 40S ribosomal protein S4e-144
TC1161568310.00434ref|NP_175314.1| 40S ribosomal protein S7 homolog, putative [Arabidopsis thaliana]4e-085
TC1241091628200.00437sp|P17340|PLAS_LYCES Plastocyanin, chloroplast precursor6e-060
TC1173790730.00507sp|P32980|ATPD_TOBAC ATP synthase delta chain, chloroplast precursore-102
TC1240611500.00531gb|AAF64190.1|AF245665_1 plastid ribosomal protein S10 precursor [Mesembryanthemum crystallinum] 2e-063
TC115938513350.0059sp|P23322|PSBO_LYCES Oxygen-evolving enhancer protein 1, chloroplast precursor (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein)0.0
TC1171340090.00603dbj|BAC66487.1| translation-inhibitor protein [Gentiana triflora] 2e-074
TC1256850510.00607sp|P30956|RK28_TOBAC 50S RIBOSOMAL PROTEIN L28, CHLOROPLAST PRECURSOR (CL28)1e-060
TC1163805100.00629sp|P00061|CYC_SOLTU Cytochrome c1e-059
TC12372894300.0063sp|Q41229|PSE2_NICSY Photosystem I reaction center subunit IV B, chloroplast precursor (PSI-E B)1e-038
TC123710911352130.00673sp|P05349|RBS4_LYCES Ribulose bisphosphate carboxylase small chain 3B, chloroplast precursor (RuBisCO small subunit 3B)e-100
TC1157985010.00723No hits found
TC12506901110.00725dbj|BAA88985.2| Ntdin [Nicotiana tabacum] 2e-077
TC11661110110.00728ref|NP_565969.1| rhodanese-like domain protein [Arabidopsis thaliana]2e-073
TC1238316020.0074sp|Q9XHE4|R37A_GOSHI 60S RIBOSOMAL PROTEIN L37A1e-046
TC1157481112440.00813sp|P80470|PSBY_SPIOL Photosystem II core complex proteins psbY, chloroplast precursor (L-arginine metabolising enzyme) (L-AME) [Contains: Photosystem II protein psbY-1 (psbY-A1); Photosystem II protein psbY-2 (psbY-A2)]3e-037
TC11604999370.00978gb|AAD27878.1|AF139466_1 chlorophyll a/b binding protein CP29 [Vigna radiata] e-138
TC124093619160.01049sp|P10708|CB12_LYCES Chlorophyll A-B binding protein 7, chloroplast precursor (LHCI type II CAB-7)e-160
TC1159821017460.01066sp|P14278|CB24_LYCES Chlorophyll A-B binding protein 4, chloroplast precursor (LHCII type I CAB-4) (LHCP)e-155
TC12477310250.01153sp|P32045|PRP2_LYCES Pathogenesis-related protein P2 precursor7e-083
TC11680001100.01252emb|CAD10377.1| profilin [Lycopersicon esculentum] 1e-061
TC12522601100.01252ref|NP_568749.1| expressed protein [Arabidopsis thaliana]5e-037
TC116141519200.01254ref|NP_192427.1| oxygen-evolving complex protein 16, chloroplast precursor (OEC16) [Arabidopsis thaliana]2e-058
TC11634410100.01256ref|NP_196527.1| inorganic pyrophosphatase - like protein [Arabidopsis thaliana]e-122
TC1239732419660.01332sp|Q43517|FER1_LYCES Ferredoxin I, chloroplast precursor6e-066
TC1160065200.01453dbj|BAC23054.1| caffeoyl-CoA O-methyltransferase [Solanum tuberosum] 2e-033
TC1250120300.01489sp|O82572|PRO1_RICCO Profilin 15e-054
TC1260720300.01489gb|AAF24498.1|AF214107_1 DnaJ-like protein [Arabidopsis thaliana] 3e-044
TC1256380300.01489ref|NP_181023.1| fatty acid hydroxylase (FAH1) [Arabidopsis thaliana]e-110
TC1243060300.01489gb|AAL29212.1|AF354454_1 putative acyl-CoA synthetase [Capsicum annuum] 0.0
TC1161520300.01489dbj|BAC23029.1| tyramine hydroxycinnamoyl transferase [Solanum tuberosum] 2e-085
TC1254780300.01489ref|NP_173692.1| putative 40S ribosomal protein S18 [Arabidopsis thaliana]7e-069
TC1162190300.01489gb|AAO41731.1| cytoplasmic ribosomal protein S14 [Brassica napus] 8e-060
TC1209320300.01489ref|NP_189295.2| Eukaryotic peptide chain release factor subunit 1 (ERF1) [Arabidopsis thaliana] e-143
TC1245650300.01489ref|NP_173899.1| F-box containing tubby family protein [Arabidopsis thaliana]e-178
TC1258270300.01489gb|AAD40002.1|AF150096_1 small zinc finger-like protein [Lycopersicon esculentum] 4e-042
TC1184440300.01489sp|O04161|AT12_LYCES Ammonium transporter 1, member 2 (LeAMT1;2)0.0
TC1256140300.01489ref|NP_187296.2| anion exchange protein family [Arabidopsis thaliana]6e-063
TC1179780300.01489gb|AAM60961.1| seed maturation-like protein [Arabidopsis thaliana] 9e-037
TC1257400300.01489ref|NP_564482.1| expressed protein [Arabidopsis thaliana]8e-032
TC1275890300.01489No hits found
TC115869111170.01583gb|AAO72389.1| synaptobrevin-like protein [Oryza sativa (japonica cultivar-group)] e-111
TC124080722330.01684sp|P27141|CAHC_TOBAC CARBONIC ANHYDRASE, CHLOROPLAST PRECURSOR (CARBONATE DEHYDRATASE)e-145
TC1277633000.01689pir||C86149 T1N6.18 protein - Arabidopsis thaliana6e-024
TC1246673000.01689sp|P17642|PRS2_SOLTU Pathogenesis-related protein STH-21e-083
TC1241533000.01689sp|Q03662|GTX1_TOBAC Probable glutathione S-transferase (Auxin-induced protein PGNT1/PCNT110)5e-076
TC1163683000.01689gb|AAG49031.1| ripening regulated protein DDTFR10/A [Lycopersicon esculentum] e-107
TC1244093000.01689ref|NP_190879.1| DEAD/DEAH box RNA helicase protein, putative [Arabidopsis thaliana]e-163
TC1247473000.01689ref|NP_198023.1| glutamyl-tRNA synthetase [Arabidopsis thaliana]0.0
TC1257213000.01689sp|P12424|GLNA_NICPL GLUTAMINE SYNTHETASE (GLUTAMATE--AMMONIA LIGASE)e-155
TC1173733000.01689pir||T03843 prohibitin - common tobaccoe-123
TC1165563000.01689dbj|BAC57469.1| pyruvate dehydrogenase E1 alpha subunit [Beta vulgaris] e-165
TC1179233000.01689ref|NP_173390.1| ribokinase, putative [Arabidopsis thaliana]e-123
TC1255523000.01689dbj|BAB01237.1| contains similarity to shikimate kinase precursor [Arabidopsis thaliana] 9e-062
TC1214383000.01689sp|P94026|RBMT_TOBAC Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplast precursor ([Ribulose-bisphosphate-carboxylase]-lysine N-methyltransferase) (RuBisCO methyltransferase)9e-071
TC1237573000.01689sp|P46297|RS23_FRAAN 40S RIBOSOMAL PROTEIN S23 (S12)4e-076
TC1261233000.01689gb|AAK92832.1| putative glycyl tRNA synthetase [Arabidopsis thaliana] 0.0
TC1176103000.01689ref|NP_783272.1| ribosomal protein L2 [Atropa belladonna]e-150
TC1167773000.01689ref|NP_564596.1| ubiquitin-specific protease 6 (UBP6), putative [Arabidopsis thaliana]0.0
TC1258783000.01689gb|AAL30819.1|AF435451_1 calcium/calmodulin-dependent protein kinase CaMK2 [Nicotiana tabacum] 0.0
TC1253993000.01689ref|NP_566716.1| protein kinase, putative [Arabidopsis thaliana]e-156
TC1260493000.01689ref|NP_193190.1| CCAAT-binding transcription factor subunit A(CBF-A) [Arabidopsis thaliana]8e-054
TC1180673000.01689ref|NP_567171.1| zinc finger (C3HC4-type RING finger) protein family [Arabidopsis thaliana]6e-038
TC1172143000.01689ref|NP_197431.1| putative protein [Arabidopsis thaliana] e-111
TC1249582720.01759dbj|BAB13710.1| elicitor resposible protein [Nicotiana tabacum]3e-020
TC1165366030.01814gb|AAF23126.1|AF198388_1 cystatin [Lycopersicon esculentum] e-130
TC1158648230.0186gb|AAD13388.1| ribosomal protein L27a [Petunia x hybrida] 6e-079
TC1168040070.01879pir||D49539 xyloglucan endo-1,4-beta-D-glucanase (EC 3.2.1.-) - tomatoe-179
TC1170640070.01879ref|NP_564388.1| expressed protein [Arabidopsis thaliana]0.0
TC1167211400.01906ref|NP_189233.1| acyltransferase family [Arabidopsis thaliana] 2e-039
TC1245321400.01906ref|NP_177984.1| ribosomal protein L13, putative [Arabidopsis thaliana]e-100
TC123957212110.01971gb|AAP03875.1| putative chloroplast thiazole biosynthetic protein [Nicotiana tabacum] e-173
TC123857511300.02001sp|P07369|CB2G_LYCES Chlorophyll A-B binding protein 3C, chloroplast precursor (LHCII type I CAB-3C) (LHCP)e-148
TC1256840520.02014gb|AAM63708.1| submergence induced protein 2A [Arabidopsis thaliana]8e-085
TC1237410520.02014ref|NP_182281.1| photolyase/blue-light receptor (PHR2) [Arabidopsis thaliana]e-150
TC1160509730.02139gb|AAL07213.1| unknown protein [Arabidopsis thaliana] e-179
TC1241590190.0215gb|AAF16869.1|AF109693_1 allergen-like protein BRSn20 [Sambucus nigra] 5e-044
TC1172704100.02163dbj|BAA74434.1| similar to hsr203J [Lycopersicon esculentum] 0.0
TC1158514100.02163pir||T06406 ripening protein E8 homolog - tomato1e-086
TC1158624100.02163sp|P08706|RBS1_LYCES Ribulose bisphosphate carboxylase small chain 1, chloroplast precursor (RuBisCO small subunit 1) (LESS17)3e-075
TC1237821128370.02172sp|P07370|CB2B_LYCES Chlorophyll A-B binding protein 1B, chloroplast precursor (LHCII type I CAB-1B) (LHCP)e-146
TC1164690410.02234sp|P31684|4CL1_SOLTU 4-coumarate--CoA ligase 1 (4CL 1) (4-coumaroyl-CoA synthase 1)0.0
TC1241190410.02234gb|AAG43824.1|AF212318_1 cinnamic acid 4-hydroxylase [Capsicum annuum] 0.0
TC1249750410.02234ref|NP_187644.1| transcription initiation factor IIB (TFIIB) [Arabidopsis thaliana]e-127
TC1165550410.02234pir||T07871 miraculin homolog, root-knot nematode-induced - tomatoe-117
TC1252095020.02341sp|Q40157|MT2A_LYCES Metallothionein-like protein type 2 A (LeMT(A))6e-024
TC1167571970.02344pir||T07173 hypothetical protein SEND32, senescence down-regulated - tomato (fragment)3e-029
TC12429461040.02431sp|P29790|ATPG_TOBAC ATP synthase gamma chain, chloroplast precursore-171
TC1243451510.0244sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplast precursor (28RNP)e-104
TC1159761510.0244sp|Q40460|RCA1_TOBAC Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplast precursor (RuBisCO activase 1) (RA 1)0.0
TC1162911510.0244gb|AAG13629.1|AC078840_20 putative steroid membrane binding protein [Oryza sativa (japonica cultivar-group)] 5e-077
TC123967810340.02495sp|P29795|PSBP_LYCES Oxygen-evolving enhancer protein 2, chloroplast precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein)e-127
TC1157135610.0254pir||T07733 probable chaperonin 60 beta chain precursor, chloroplast (clone potbchap1) - potato0.0
TC1172154010.02556ref|NP_200615.1| outer membrane lipoprotein - like [Arabidopsis thaliana]2e-075
TC1245464010.02556sp|Q96558|UGDH_SOYBN UDP-GLUCOSE 6-DEHYDROGENASE (UDP-GLC DEHYDROGENASE) (UDP-GLCDH) (UDPGDH)0.0
TC1242904010.02556ref|NP_190560.1| 60S RIBOSOMAL PROTEIN - like [Arabidopsis thaliana]6e-043
TC1185114010.02556ref|NP_190107.1| putative protein [Arabidopsis thaliana]1e-028
TC1258924010.02556No hits found
TC1160786510.0264ref|NP_564707.2| elongation factor, putative [Arabidopsis thaliana]0.0
TC11661941150.0274sp|Q05539|CHIA_LYCES Acidic 26 kDa endochitinase precursore-149
TC1240125110.02819pir||T07403 TSI-1 protein - tomato5e-066
TC1158735110.02819ref|NP_193037.1| oxidoreductase, zinc-binding dehydrogenase family [Arabidopsis thaliana]e-133
TC1168055110.02819ref|NP_200987.1| calnexin - like protein [Arabidopsis thaliana]0.0
TC1160535110.02819ref|NP_177466.1| putative transcription factor BTF3 (RNA polymerase B transcription factor 3) [Arabidopsis thaliana]2e-047
TC11628724170.02828ref|NP_173960.1| hydrolase, alpha/beta fold family [Arabidopsis thaliana]2e-032
TC12396828200.02884sp|P29795|PSBP_LYCES Oxygen-evolving enhancer protein 2, chloroplast precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein)3e-077
TC12426625180.029pir||T16958 photosystem I psaH precursor - wood tobacco2e-051
TC11618212760.03068sp|P54773|PSBS_LYCES Photosystem II 22 kDa protein, chloroplast precursor (CP22)2e-083
TC1248860060.03315pir||T01932 RNA binding protein homolog - common tobacco (fragment)e-164
TC1246730060.03315gb|AAL67991.1| dehydration-induced protein RD22-like protein [Gossypium hirsutum] 2e-086
TC1162270060.03315emb|CAD58628.1| SUI1 protein [Coffea arabica] 1e-055
TC1249910060.03315ref|NP_565968.1| expressed protein [Arabidopsis thaliana]1e-053
TC116076612310.03327ref|NP_188060.1| glycolate oxidase, putative [Arabidopsis0.0
TC12379133170.03368sp|Q43843|RPE_SOLTU Ribulose-phosphate 3-epimerase, chloroplast precursor (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) (R5P3E)e-140
TC124113123230.03446pir||S04125 chlorophyll a/b-binding protein type III precursor - tomatoe-136
TC11610551390.03558sp|Q43513|MT2Y_LYCES Metallothionein-like protein type 21e-016
TC1162582400.03639pir||T07008 peroxidase (EC 1.11.1.7) precursor, defense-related - tomatoe-165
TC1162232400.03639ref|NP_172147.2| 2-oxoglutarate-dependent dioxygenase, putative [Arabidopsis thaliana]e-113
TC1170611080.03688No hits found
TC1167673400.03914gb|AAG34872.1|AF249913_1 In2-1 protein [Glycine max] 4e-089
TC1169134200.03958dbj|BAA83469.1| Csf-1 [Cucumis sativus] 2e-060
TC1163294200.03958prf||1909359A ribosomal protein S19 4e-062
TC12402811100.04027pir||S46534 ubiquinol-cytochrome-c reductase (EC 1.10.2.2) Rieske iron-sulfur protein - potato e-128
TC12428641170.04092pir||S57792 acetyl-CoA C-acyltransferase (EC 2.3.1.16) B precursor, peroxisomal - mango (fragment) 1e-089
TC12401525170.04281sp|P27489|CB23_LYCES Chlorophyll A-B binding protein 13, chloroplast precursor (LHCII type III CAB-13)e-146
TC1158561220160.04357sp|P08706|RBS1_LYCES Ribulose bisphosphate carboxylase small chain 1, chloroplast precursor (RuBisCO small subunit 1) (LESS17)5e-095
TC12415552170.04442sp|Q9ARF9|HPPD_SOLSC 4-hydroxyphenylpyruvate dioxygenase (4HPPD) (HPD) (HPPDase)8e-036
TC1243320290.04713emb|CAA72384.1| 14-3-3 protein [Solanum tuberosum] e-135
TC1161302090.04786dbj|BAB16428.1| P-rich protein EIG-I30 [Nicotiana tabacum] 9e-035
TC1164982510.04934pir||T07732 tuberisation-related protein - potatoe-105
TC1247041630.04997gb|AAM66965.1| unknown [Arabidopsis thaliana] 8e-054