Tomato Functional Genomics Database (TFGD)

Expression of LE1O19

Experiment: trancriptome profiling of pennellii ILs

hybridization	ratio	FDR (corrected p value)
1-1-3/M82	1.36193	1
2-1/M82	1.43112	0.341
2-4/M82	1.27465	0.371
2-5/M82	1.4424	0.779
3-5/M82	0.86242	0.37
5-1/M82	0.86666	0.414
5-2/M82	0.89912	0.75
5-4/M82	0.82788	0.337
5-5/M82	0.75124	0.622
8-1-1/M82	1.34023	0.381
8-2-1/M82	1.20087	0.781
8-2/M82	1.14471	0.799
8-3-1/M82	1.12939	0.475
8-3/M82	1.12584	0.753
10-2-2/M82	1.02759	1
11-1/M82	1.01957	0.978
12-1-1/M82	1.11139	0.633
12-1/M82	1.49408	0.396
12-2/M82	0.85807	0.167
12-3/M82	0.65717	0.047

Experiment: Impact of sucrose retrieval upon ex vitro acclimatization

hybridization	ratio	FDR (corrected p value)
vitro_Suc+24h/vitro_Suc-24h leaf	N/A	N/A

Experiment: Transcriptional profiles of drought-responsive genes in modulating transcription, signal transduction and biochemical pathways in tomato

hybridization	ratio	FDR (corrected p value)
IL2-5 drought stress/control	1.05757	0.982
IL9-1 drought stress/control	0.947	0.591
M82 drought stress/control	1.1772	1

Experiment: Transcription profiling of tomato strains during fruit set

hybridization	ratio	FDR (corrected p value)
AS-IAA9/WT (0 day post Anthesis)	1.0303	1
AS-IAA9/WT (beginning of stage)	0.98193	0.837
AS-IAA9/WT (4 day Post-anthesis)	1.05381	0.997

Experiment: Transcription profiling of tomato plants at three time points in the light:dark cycle

hybridization	ratio	FDR (corrected p value)
ZT8/ZT0	N/A	N/A
ZT16/ZT0	N/A	N/A
ZT20/ZT0	N/A	N/A

Experiment: Transcription profiling of tomato shoots and roots from plants systemically infected by TSWV reveals organ-specific transcriptional responses

hybridization	ratio	FDR (corrected p value)
Root_TSWV/Root_mock	1.16097	1
Leave_TSWV/Leave_mock	0.89961	0.409

Experiment: Transcription profiling of roots and leaves of tomato plants colonized by the arbuscular mycorrhizal fungus Glomus mosseae

hybridization	ratio	FDR (corrected p value)
Root_MYC/Root_Non_MYC	0.99222	1
Leave_MYC/Leave_Non_MYC	0.96014	0.817

Experiment: Ectopic expression of a MYB transcription factor defines a set of co-regulated genes involved in phenylalanine and phenylpropanoid synthesis in tomato fruit

hybridization	ratio	FDR (corrected p value)
PhODO1-7949/M82 (Breaker)	N/A	N/A
PhODO1-7949/M82 (Br+5)	N/A	N/A
PhODO1-8117/M82 (Breaker)	N/A	N/A
PhODO1-8117/M82 (Br+5)	N/A	N/A

Experiment: Regulatory control of high levels of carotenoid accumulation in potato tubers

hybridization	ratio	FDR (corrected p value)
POR03/Atlantic	0.9716	0.547

Experiment: Differential modulation of photosynthesis, signaling, and transcriptional regulation between tolerant and sensitive tomato genotypes under cold stress

hybridization	ratio	FDR (corrected p value)
LA1777 cold stress/LA1777 no stress	N/A	N/A
LA4024 cold stress/LA4024 no stress	N/A	N/A
LA3969 cold stress/LA3969 no stress	N/A	N/A