Identify abundant genes
Select samples:
mock PAMPs 30 min
cold shock protein 22 (csp22) 30 min
flagellin 22 (flg22) 30 min
flagellin II-28 (flgII-28) 30 min
Lipopolysaccharides (LPS) 30 min
Peptidoglycan (PGN) 30 min
mock PAMPs 6h
cold shock protein 22 (csp22) 6 h
flagellin 22 (flg22) 6h
flagellin II-28 (flgII-28) 6h
Lipopolysaccharides (LPS) 6 h
Peptidoglycan (PGN) 6h
mock bacteria 30 min
DC3000 30 min
DC3000ΔhrcQ-U 30 min
DC3000ΔhrcQ-UΔfliC 30 min
DC3000Δ28 30 min
DC3000ΔAvrPtoΔAvrPtoB 30 min
Pseudomonas fluorescens 30 min
Pseudomonas putida 30 min
Agrobacterium tumefaciens 30 min
mock bacteria 6 h
DC3000 6 h
DC3000ΔhrcQ-U 6 h
DC3000ΔhrcQ-UΔfliC 6 h
DC3000Δ28 6 h
DC3000ΔAvrPtoΔAvrPtoB 6 h
Pseudomonas fluorescens 6 h
Pseudomonas putida 6 h
Agrobacterium tumefaciens 6 h
and
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