Solyc02g089260 expression

Experiment: Transcriptome profiling of pennellii ILs
sample IDgenotype descriptionRPM
S0001M82fruit, red ripe, M8213.9
S00021-1fruit, red ripe, S. pennellii IL1-110.63
S00031-1-2fruit, red ripe, S. pennellii IL1-1-210.04
S00041-1-3fruit, red ripe, S. pennellii IL1-1-311.89
S00051-2fruit, red ripe, S. pennellii IL1-29.67
S00061-3fruit, red ripe, S. pennellii IL1-314.67
S00071-4fruit, red ripe, S. pennellii IL1-410.18
S00081-4-18fruit, red ripe, S. pennellii IL1-4-1812.34
S00092-1fruit, red ripe, S. pennellii IL2-113.59
S00102-1-1fruit, red ripe, S. pennellii IL2-1-110.66
S00112-2fruit, red ripe, S. pennellii IL2-215.19
S00122-3fruit, red ripe, S. pennellii IL2-312.78
S00132-4fruit, red ripe, S. pennellii IL2-410.04
S00142-5fruit, red ripe, S. pennellii IL2-514.22
S00152-6fruit, red ripe, S. pennellii IL2-613.37
S00162-6-5fruit, red ripe, S. pennellii IL2-6-511.31
S00173-1fruit, red ripe, S. pennellii IL3-111.98
S00183-2fruit, red ripe, S. pennellii IL3-29.61
S00203-4fruit, red ripe, S. pennellii IL3-412.8
S00213-5fruit, red ripe, S. pennellii IL3-511.21
S00224-1fruit, red ripe, S. pennellii IL4-112.08
S00234-1-1fruit, red ripe, S. pennellii IL4-1-111.29
S00244-2fruit, red ripe, S. pennellii IL4-214.95
S00254-3fruit, red ripe, S. pennellii IL4-312.99
S00264-3-2fruit, red ripe, S. pennellii IL4-3-210.47
S00274-4fruit, red ripe, S. pennellii IL4-415.13
S00285-1fruit, red ripe, S. pennellii IL5-112.66
S00295-2fruit, red ripe, S. pennellii IL5-210.98
S00305-3fruit, red ripe, S. pennellii IL5-38.12
S00315-4fruit, red ripe, S. pennellii IL5-48.54
S00325-5fruit, red ripe, S. pennellii IL5-511.19
S00346-2fruit, red ripe, S. pennellii IL6-210.35
S00356-2-2fruit, red ripe, S. pennellii IL6-2-221.75
S00366-3fruit, red ripe, S. pennellii IL6-313.78
S00376-4fruit, red ripe, S. pennellii IL6-411.21
S00387-1fruit, red ripe, S. pennellii IL7-110.69
S00397-2fruit, red ripe, S. pennellii IL7-216.1
S00407-3fruit, red ripe, S. pennellii IL7-312.47
S00417-4fruit, red ripe, S. pennellii IL7-412.35
S00427-4-1fruit, red ripe, S. pennellii IL7-4-111.23
S00437-5fruit, red ripe, S. pennellii IL7-513.47
S00447-5-5fruit, red ripe, S. pennellii IL7-5-510.4
S00458-1fruit, red ripe, S. pennellii IL8-110.48
S00468-1-1fruit, red ripe, S. pennellii IL8-1-111.71
S00478-1-5fruit, red ripe, S. pennellii IL8-1-510.53
S00488-2fruit, red ripe, S. pennellii IL8-213.37
S00498-2-1fruit, red ripe, S. pennellii IL8-2-111.32
S00508-3fruit, red ripe, S. pennellii IL8-310.08
S00518-3-1fruit, red ripe, S. pennellii IL8-3-112.14
S00529-1fruit, red ripe, S. pennellii IL9-111.13
S00539-1-2fruit, red ripe, S. pennellii IL9-1-212.09
S00549-1-3fruit, red ripe, S. pennellii IL9-1-311.24
S00559-2fruit, red ripe, S. pennellii IL9-210.94
S00569-2-5fruit, red ripe, S. pennellii IL9-2-512.36
S00579-2-6fruit, red ripe, S. pennellii IL9-2-611.7
S00589-3fruit, red ripe, S. pennellii IL9-314.74
S00599-3-1fruit, red ripe, S. pennellii IL9-3-19.41
S00609-3-2fruit, red ripe, S. pennellii IL9-3-213.71
S006110-1fruit, red ripe, S. pennellii IL10-114.04
S006210-1-1fruit, red ripe, S. pennellii IL10-1-111.66
S006310-2fruit, red ripe, S. pennellii IL10-212.59
S006410-2-2fruit, red ripe, S. pennellii IL10-2-212.49
S006510-3fruit, red ripe, S. pennellii IL10-310.96
S006611-1fruit, red ripe, S. pennellii IL11-110.69
S006711-2fruit, red ripe, S. pennellii IL11-213.41
S006811-3fruit, red ripe, S. pennellii IL11-39.88
S006911-4fruit, red ripe, S. pennellii IL11-411.68
S007011-4-1fruit, red ripe, S. pennellii IL11-4-110.44
S007112-1fruit, red ripe, S. pennellii IL12-15.05
S007212-1-1fruit, red ripe, S. pennellii IL12-1-18.6
S007312-2fruit, red ripe, S. pennellii IL12-29.64
S007412-3fruit, red ripe, S. pennellii IL12-312.16
S007512-3-1fruit, red ripe, S. pennellii IL12-3-110.28
S007612-4fruit, red ripe, S. pennellii IL12-411.87
S007712-4-1fruit, red ripe, S. pennellii IL12-4-110.37

Experiment: Transcriptome analysis of various tissues in tomato cultivar Heinz and the wild relative Solanum pimpinellifolium
sample IDgenotype descriptionRPM
S0584HeinzHeinz unopened flower buds3.54
S0585HeinzHeinz fully opened flowers5.28
S0586HeinzHeinz 1 cm fruits4.33
S0587HeinzHeinz 2 cm fruits17.2
S0588HeinzHeinz 3 cm fruits21.21
S0589HeinzHeinz mature green fruits22.63
S0590HeinzHeinz breaker fruits26.67
S0591HeinzHeinz breaker+10 fruits52.83
S0592HeinzHeinz roots23.81
S0593HeinzHeinz leaves3.78
S0594pimpinellifolium immature green fruits31.8
S0595pimpinellifolium breaker fruits31.97
S0596pimpinellifolium breaker+5 fruits41.74
S0597pimpinellifolium leaves5.56

Experiment: Transcriptome profiling of young flower buds of WT, sun, ovate and fs8.1 NILs in the LA1589 background
sample IDgenotype descriptionRPM
S0929LA1589LA1589 young flower buds at 4 days post-initiation of floral meristem21.01
S0930LA1589LA1589 young flower buds at 6 days post-initiation of floral meristem20.65
S0931LA1589LA1589 young flower buds at 8 days post-initiation of floral meristem18.38
S0932LA1589LA1589 young flower buds at 10 days post-initiation of floral meristem23.76
S0933LA1589LA1589 young flower buds at 13 days post-initiation of floral meristem21.89
S0934LA1589LA1589 young flower buds at 16 days post-initiation of floral meristem17.42
S0935sun NIL in the LA1589 backgroundsun young flower buds at 4 days post-initiation of floral meristem18.67
S0936sun NIL in the LA1589 backgroundsun young flower buds at 6 days post-initiation of floral meristem20.97
S0937sun NIL in the LA1589 backgroundsun young flower buds at 8 days post-initiation of floral meristem18.33
S0938sun NIL in the LA1589 backgroundsun young flower buds at 10 days post-initiation of floral meristem25.63
S0939sun NIL in the LA1589 backgroundsun young flower buds at 13 days post-initiation of floral meristem19.46
S0940sun NIL in the LA1589 backgroundsun young flower buds at 16 days post-initiation of floral meristem18.11
S0941ovate NIL in the LA1589 backgroundovate young flower buds at 4 days post-initiation of floral meristem19.7
S0942ovate NIL in the LA1589 backgroundovate young flower buds at 6 days post-initiation of floral meristem20.55
S0943ovate NIL in the LA1589 backgroundovate young flower buds at 8 days post-initiation of floral meristem18.43
S0944ovate NIL in the LA1589 backgroundovate young flower buds at 10 days post-initiation of floral meristem23.79
S0945ovate NIL in the LA1589 backgroundovate young flower buds at 13 days post-initiation of floral meristem21.66
S0946ovate NIL in the LA1589 backgroundovate young flower buds at 16 days post-initiation of floral meristem15.27
S0947fs8.1 NIL in the LA1589 backgroundfs8.1 young flower buds at 4 days post-initiation of floral meristem19.78
S0948fs8.1 NIL in the LA1589 backgroundfs8.1 young flower buds at 6 days post-initiation of floral meristem20.89
S0949fs8.1 NIL in the LA1589 backgroundfs8.1 young flower buds at 8 days post-initiation of floral meristem17.37
S0950fs8.1 NIL in the LA1589 backgroundfs8.1 young flower buds at 10 days post-initiation of floral meristem25.8
S0951fs8.1 NIL in the LA1589 backgroundfs8.1 young flower buds at 13 days post-initiation of floral meristem21.88
S0952fs8.1 NIL in the LA1589 backgroundfs8.1 young flower buds at 16 days post-initiation of floral meristem16.2

Experiment: Transcriptome analysis of various tissues in wild species S. pimpinellifolium, LA1589
sample IDgenotype descriptionRPM
S0608LA1589anthesis flowers (0DPA)18.48
S0609LA158910 days post anthesis fruit (10 DPA1)26.15
S0610LA158910 days post anthesis fruit 2 (10 DPA2)24.79
S0611LA158920 days post anthesis fruit (20DPA)18.73
S0612LA1589rippening fruit (33DPA)19.83
S0613LA1589cotyledons (COTYL)23.91
S0614LA1589hypocotyl (HYPO)27.3
S0615LA1589vegitative meristems (MERI)32.4
S0616LA1589mature leaves (ML)14.25
S0617LA1589whole root (ROOT)31.66
S0618LA1589young flower buds (YFB)21.97
S0619LA1589young leaves (YL)12.71

Experiment: Transcriptome sequencing of tomato leaves treated with different bacteria and PAMPs
sample IDgenotype descriptionRPM
S0620Rio Grande prf3 (deletion in Prf)mock PAMPs 30 min10.26
S0621Rio Grande prf3 (deletion in Prf)cold shock protein 22 (csp22) 30 min8.37
S0622Rio Grande prf3 (deletion in Prf)flagellin 22 (flg22) 30 min8.55
S0623Rio Grande prf3 (deletion in Prf)flagellin II-28 (flgII-28) 30 min8.54
S0624Rio Grande prf3 (deletion in Prf)Lipopolysaccharides (LPS) 30 min8.9
S0625Rio Grande prf3 (deletion in Prf)Peptidoglycan (PGN) 30 min8.62
S0626Rio Grande prf3 (deletion in Prf)mock PAMPs 6h18.03
S0627Rio Grande prf3 (deletion in Prf)cold shock protein 22 (csp22) 6 h30.08
S0628Rio Grande prf3 (deletion in Prf)flagellin 22 (flg22) 6h24.41
S0629Rio Grande prf3 (deletion in Prf)flagellin II-28 (flgII-28) 6h27.41
S0630Rio Grande prf3 (deletion in Prf)Lipopolysaccharides (LPS) 6 h25.04
S0631Rio Grande prf3 (deletion in Prf)Peptidoglycan (PGN) 6h 23.1
S0632Rio Grande prf3 (deletion in Prf)mock bacteria 30 min8.63
S0633Rio Grande prf3 (deletion in Prf)DC3000 30 min9.28
S0634Rio Grande prf3 (deletion in Prf)DC3000ΔhrcQ-U 30 min8.06
S0635Rio Grande prf3 (deletion in Prf)DC3000ΔhrcQ-UΔfliC 30 min8.11
S0636Rio Grande prf3 (deletion in Prf)DC3000Δ28 30 min8.54
S0637Rio Grande prf3 (deletion in Prf)DC3000ΔAvrPtoΔAvrPtoB 30 min9.1
S0638Rio Grande prf3 (deletion in Prf)Pseudomonas fluorescens 30 min9.11
S0639Rio Grande prf3 (deletion in Prf)Pseudomonas putida 30 min9.28
S0640Rio Grande prf3 (deletion in Prf)Agrobacterium tumefaciens 30 min9.6
S0641Rio Grande prf3 (deletion in Prf)mock bacteria 6 h20.37
S0642Rio Grande prf3 (deletion in Prf)DC3000 6 h23.33
S0643Rio Grande prf3 (deletion in Prf)DC3000ΔhrcQ-U 6 h22.36
S0644Rio Grande prf3 (deletion in Prf)DC3000ΔhrcQ-UΔfliC 6 h18.91
S0645Rio Grande prf3 (deletion in Prf)DC3000Δ28 6 h25.79
S0646Rio Grande prf3 (deletion in Prf)DC3000ΔAvrPtoΔAvrPtoB 6 h25.01
S0647Rio Grande prf3 (deletion in Prf)Pseudomonas fluorescens 6 h27.02
S0648Rio Grande prf3 (deletion in Prf)Pseudomonas putida 6 h32.12
S0649Rio Grande prf3 (deletion in Prf)Agrobacterium tumefaciens 6 h19.93

Experiment: Transcriptome or gene expression of various fruit tissue in FW3.2 NILs
sample IDgenotype descriptionRPM
S0671Yellow Stuffer (cultivated allele of fw3.2)fw3.2(ys) 5 Days Post Anthesis Pericarp15.32
S0672Yellow Stuffer (wild allele of fw3.2)fw3.2(wt) 5 Days Post Anthesis Pericarp15.83
S0673Yellow Stuffer (cultivated allele of fw3.2)fw3.2(ys) 7 Days Post Anthesis Pericarp20.29
S0674Yellow Stuffer (wild allele of fw3.2)fw3.2(wt) 7 Days Post Anthesis Pericarp20.28
S0675Yellow Stuffer (cultivated allele of fw3.2)fw3.2(ys) 10 Days Post Anthesis Pericarp16.04
S0676Yellow Stuffer (wild allele of fw3.2)fw3.2(wt) 10 Days Post Anthesis Pericarp16.14
S0677Yellow Stuffer (cultivated allele of fw3.2)fw3.2(ys) 5 Days Post Anthesis Seed14.87
S0678Yellow Stuffer (wild allele of fw3.2)fw3.2(wt) 5 Days Post Anthesis Seed14.75
S0679Yellow Stuffer (cultivated allele of fw3.2)fw3.2(ys) 7 Days Post Anthesis Seed18.91
S0680Yellow Stuffer (wild allele of fw3.2)fw3.2(wt) 7 Days Post Anthesis Seed18.9
S0681Yellow Stuffer (cultivated allele of fw3.2)fw3.2(ys) 10 Days Post Anthesis Seed20.4
S0682Yellow Stuffer (wild allele of fw3.2)fw3.2(wt) 10 Days Post Anthesis Seed17.62
S0683Yellow Stuffer (cultivated allele of fw3.2)fw3.2(ys) young flower bud9.85
S0684Yellow Stuffer (wild allele of fw3.2)fw3.2(wt) young flower bud12.03

Experiment: Tissue-specific transcriptome profiling of Solanum pimpinellifolium ovaries and fruit using LCM-coupled to RNA-seq
sample IDgenotype descriptionRPM
S0685LA1589LA1589, Ovule 0 dpa (SA1_D0_OV)283.03
S0686sunsun, Ovule 0 dpa (SA2_D0_OV)238.79
S0687LA1589LA1589, Placenta 0 dpa (SA1_D0_PL)178.82
S0688sunsun, Placenta 0 dpa (SA2_D0_PL)261.51
S0689LA1589LA1589, Septum 0 dpa (SA1_D0_SE)203.54
S0690sunsun, Septum 0 dpa (SA2_D0_SE)158.77
S0691LA1589LA1589, Pericarp 0 dpa (SA1_D0_PE)211.41
S0692sunsun, Pericarp 0 dpa (SA2_D0_PE)175.4
S0693LA1589LA1589, Embryo 4 dpa Fruit (SA1_D4_EM)170.07
S0694sunsun, Embryo 4 dpa Fruit (SA2_D4_EM)140.56
S0695LA1589LA1589, Endosperm 4 dpa Fruit (SA1_D4_ENDO)229.83
S0696sunsun, Endosperm 4 dpa Fruit (SA2_D4_ENDO)222.12
S0697LA1589LA1589, Seed Coat 4 dpa Fruit (SA1_D4_SC)196.62
S0698sunsun, Seed Coat 4 dpa Fruit (SA2_D4_SC)176.59
S0699LA1589LA1589, Funiculus 4 dpa Fruit (SA1_D4_FU)238.37
S0700sunsun, Funiculus 4 dpa Fruit (SA2_D4_FU)319.95
S0701LA1589LA1589, Placenta 4 dpa Fruit (SA1_D4_PL)159.19
S0702sunsun, Placenta 4 dpa Fruit (SA2_D4_PL)193.7
S0703LA1589LA1589, Septum 4 dpa Fruit (SA1_D4_SE)173.57
S0704sunsun, Septum 4 dpa Fruit (SA2_D4_SE)181.82
S0705LA1589LA1589, Pericarp 4 dpa Fruit (SA1_D4_PE)221.3
S0706sunsun, Pericarp 4 dpa Fruit (SA2_D4_PE)211.93

Experiment: Transcriptome sequencing of leaves of resistant (RG-PtoR) and susceptible (RG-prf3 and RG-prf19) tomato plants treated with Pst DC3000
sample IDgenotype descriptionRPM
S0740Rio Grande-PtoRDC3000 4 h14.36
S0741Rio Grande-prf3DC3000 4 h9.36
S0742Rio Grande-prf19DC3000 4 h9.9
S0743Rio Grande-PtoRDC3000 6 h14.4
S0744Rio Grande-prf3DC3000 6 h9.62
S0745Rio Grande-prf19DC3000 6 h8.9

Experiment: Transcriptome sequencing of tomato leaves trated with diferent Pst DC3000 mutant strains
sample IDgenotype descriptionRPM
S0746Rio Grande-PtoRDC3000ΔhopQ1-1 ΔfliC 6 h9.64
S0747Rio Grande-PtoRDC3000ΔhopQ1-1 ΔavrPto ΔavrPtoB 6 h7.22
S0748Rio Grande-PtoRDC3000ΔhopQ1-1 ΔavrPto ΔavrPtoB ΔfliC 6 h9.16

Experiment: Transcriptome profiling of anthesis-stage ovaries from the fs8.1 backcrossed lines in Rio Grande background
sample IDgenotype descriptionRPM
S0749fs8.1, backcrossed line 09S204, BC4F2, Rio Grande background09S204-ee, ovary(anthesis)24.73
S0750WT, backcrossed line 09S204, BC4F2, Rio Grande background09S204-pp, ovary(anthesis)24.7
S0751fs8.1, backcrossed line 09S236, BC3F2, Rio Grande background09S236-ee, ovary(anthesis)19.43
S0752WT, backcrossed line 09S236, BC3F2, Rio Grande background09S236-pp, ovary(anthesis)23.28
S0753fs8.1, backcrossed line 09S237, BC1F4, Rio Grande background09S237-ee, ovary(anthesis)22.88
S0754WT, backcrossed line 09S237, BC1F4, Rio Grande background09S237-pp, ovary(anthesis)17.14

Experiment: Domain-wise effect of AvrPto on the tomato transcriptome 6 hours post inoculation
sample IDgenotype descriptionRPM
S0755Rio Grande-prf3D28E (pCPP45::avrPto) 6 h10.87
S0756Rio Grande-prf3D28E (pCPP45::avrPto I96A) 6 h11.5
S0757Rio Grande-prf3D28E (pCPP45::avrPto 2xA) 6 h10.35
S0758Rio Grande-prf3D28E (pCPP45::avrPto I96A + 2xA) 6 h13.19
S0759Rio Grande-prf3Mock 6 h6.12

Experiment: Transcriptome sequencing of Pti1 silenced plants after treatment of Pst DC3000ΔAvrPtoΔAvrPtoB
sample IDgenotype descriptionRPM
S0658Rio Grande prf3 (deletion in Prf)Azygous of hpPti1 DC3000ΔAvrPtoΔAvrPtoB 3 h8.11
S0659Rio Grande prf3 (deletion in Prf)hpPti1-F10 DC3000ΔAvrPtoΔAvrPtoB 3 h 9.55
S0660Rio Grande prf3 (deletion in Prf)hpPti1-F27 DC3000ΔAvrPtoΔAvrPtoB 3 h9.76
S0661Rio Grande prf3 (deletion in Prf)Azygous of hpPti1 DC3000ΔAvrPtoΔAvrPtoB 6 h9.71
S0662Rio Grande prf3 (deletion in Prf), hairpin Pti1, line F10hpPti1-F10 DC3000ΔAvrPtoΔAvrPtoB 6 h8.96
S0663Rio Grande prf3 (deletion in Prf), hairpin Pti1, line F27hpPti1-F27 ΔAvrPtoΔAvrPtoB 6 h9.29

Experiment: Gene expression in IM/FM, 2 dpi, 4 dpi and 6 dpi floral buds of wild type, lc, fas and lc/fas in the LA1589 background
sample IDgenotype descriptionRPM
S1087LA15892dpi floral buds162.03
S1088lc2dpi floral buds178.34
S1089fas2dpi floral buds175.05
S1090lc/fas2dpi floral buds188.43
S1091LA15894dpi floral buds169.78
S1092lc4dpi floral buds189.78
S1093fas4dpi floral buds181.64
S1094lc/fas4dpi floral buds144.24
S1095LA15896dpi floral buds168.11
S1096lc6dpi floral buds169.33
S1097fas6dpi floral buds189.01
S1098lc/fas6dpi floral buds157.8
S1099LA1589floral and inflorescence meristem151.28
S1100lcfloral and inflorescence meristem150.85
S1101fasfloral and inflorescence meristem145.75
S1102lc/fasfloral and inflorescence meristem163.41
S1103LA1589sympodial shoot apical meristem164.4
S1104lcsympodial shoot apical meristem198.28
S1105fassympodial shoot apical meristem178.32
S1106lc/fassympodial shoot apical meristem186.52

Experiment: RNA-Seq analysis on tomato anthesis flowers of ovate/sov1 NILs in the LA1589 background
sample IDgenotype descriptionRPM
S0764LA1589LA1589, flowers20.59
S0765ovateovate, flowers25.97
S0766sov1sov1, flowers21.68
S0767ovate/sov1ovate/sov1, flowers28.61

Experiment: Transcriptome profiling of three fruit tissues from the fw11.3 NILs in cultivated background
sample IDgenotype descriptionRPM
S0768Rio Grande (fw11.3-D)fw11.3-D Pericarp, 10 Days Post Anthesis20.67
S0769Rio Grande (fw11.3-D)fw11.3-D Septum and Placenta, 10 Days Post Anthesis16.15
S0770Rio Grande (fw11.3-D)fw11.3-D Columella, 10 Days Post Anthesis23.42
S0771Rio Grande (fw11.3-D)fw11.3-D Pericarp, 15 Days Post Anthesis25.6
S0772Rio Grande (fw11.3-D)fw11.3-D Septum and Placenta, 15 Days Post Anthesis26.16
S0773Rio Grande (fw11.3-D)fw11.3-D Columella, 15 Days Post Anthesis31.94
S0774Rio Grande (fw11.3-D)fw11.3-D Pericarp, 25 Days Post Anthesis17.1
S0775Rio Grande (fw11.3-D)fw11.3-D Septum and Placenta, 25 Days Post Anthesis16.47
S0776Rio Grande (fw11.3-D)fw11.3-D Columella, 25 Days Post Anthesis20.41
S0777Rio Grande (fw11.3-D)fw11.3-D Pericarp, 33 Days Post Anthesis18.02
S0778Rio Grande (fw11.3-D)fw11.3-D Septum and Placenta, 33 Days Post Anthesis16.29
S0779Rio Grande (fw11.3-D)fw11.3-D Columella, 33 Days Post Anthesis20.67
S0780Rio Grande (fw11.3-D)fw11.3-D Pericarp, 4 Days Post Anthesis15.38
S0781Rio Grande (fw11.3-D)fw11.3-D Septum, Placenta and Columella, 4 Days Post Anthesis14.66
S0782Rio Grande (fw11.3-D)fw11.3-D Pericarp, 7 Days Post Anthesis17.05
S0783Rio Grande (fw11.3-D)fw11.3-D Septum and Placenta, 7 Days Post Anthesis17.48
S0784Rio Grande (fw11.3-D)fw11.3-D Columella, 7 Days Post Anthesis18.62
S0785Rio Grande (fw11.3-D)fw11.3-D Pericarp, Turning17.39
S0786Rio Grande (fw11.3-D)fw11.3-D Septum and Placenta, Turning18.9
S0787Rio Grande (fw11.3-D)fw11.3-D Columella, Turning25.45
S0788Rio Grande (fw11.3-WT)fw11.3-WT Pericarp, 10 Days Post Anthesis19.83
S0789Rio Grande (fw11.3-WT)fw11.3-WT Septum and Placenta, 10 Days Post Anthesis18.07
S0790Rio Grande (fw11.3-WT)fw11.3-WT Columella, 10 Days Post Anthesis21.92
S0791Rio Grande (fw11.3-WT)fw11.3-WT Pericarp, 15 Days Post Anthesis26.62
S0792Rio Grande (fw11.3-WT)fw11.3-WT Septum and Placenta, 15 Days Post Anthesis23.54
S0793Rio Grande (fw11.3-WT)fw11.3-WT Columella, 15 Days Post Anthesis30.93
S0794Rio Grande (fw11.3-WT)fw11.3-WT Pericarp, 25 Days Post Anthesis18.43
S0795Rio Grande (fw11.3-WT)fw11.3-WT Septum and Placenta, 25 Days Post Anthesis17.06
S0796Rio Grande (fw11.3-WT)fw11.3-WT Columella, 25 Days Post Anthesis18.76
S0797Rio Grande (fw11.3-WT)fw11.3-WT Pericarp, 33 Days Post Anthesis16.51
S0798Rio Grande (fw11.3-WT)fw11.3-WT Septum and Placenta, 33 Days Post Anthesis13.48
S0799Rio Grande (fw11.3-WT)fw11.3-WT Columella, 33 Days Post Anthesis19.7
S0800Rio Grande (fw11.3-WT)fw11.3-WT Pericarp, 4 Days Post Anthesis15.86
S0801Rio Grande (fw11.3-WT)fw11.3-WT Septum, Placenta and Columella, 4 Days Post Anthesis15.09
S0802Rio Grande (fw11.3-WT)fw11.3-WT Pericarp, 7 Days Post Anthesis17.65
S0803Rio Grande (fw11.3-WT)fw11.3-WT Septum and Placenta, 7 Days Post Anthesis19.23
S0804Rio Grande (fw11.3-WT)fw11.3-WT Columella, 7 Days Post Anthesis20.32
S0805Rio Grande (fw11.3-WT)fw11.3-WT Pericarp, Turning21.97
S0806Rio Grande (fw11.3-WT)fw11.3-WT Septum and Placenta, Turning18.78
S0807Rio Grande (fw11.3-WT)fw11.3-WT Columella, Turning23.93

Experiment: Transcriptome profiling of three fruit tissues from the sun NILs in cultivated background
sample IDgenotype descriptionRPM
S0808Sun1642 (sun-WT)SA3 Pericarp and exocarp, 4 Days Post Anthesis17.1
S0809Sun1642 (sun-WT)SA3 Septum and seeds, 4 Days Post Anthesis15.1
S0810Sun1642 (sun-WT)SA3 Pericarp, 7 Days Post Anthesis16.82
S0811Sun1642 (sun-WT)SA3 Septum, 7 Days Post Anthesis16.86
S0812Sun1642 (sun-WT)SA3 Seeds, 7 Days Post Anthesis19.87
S0813Sun1642 (sun-WT)SA3 Pericarp, 10 Days Post Anthesis19.37
S0814Sun1642 (sun-WT)SA3 Septum, 10 Days Post Anthesis21.65
S0815Sun1642 (sun-WT)SA3 Seeds, 10 Days Post Anthesis15.29
S0816Sun1642 (sun-D)SA4 Pericarp and exocarp, 4 Days Post Anthesis15.13
S0817Sun1642 (sun-D)SA4 Septum and seeds, 4 Days Post Anthesis17.27
S0818Sun1642 (sun-D)SA4 Pericarp, 7 Days Post Anthesis18.62
S0819Sun1642 (sun-D)SA4 Septum, 7 Days Post Anthesis16.92
S0820Sun1642 (sun-D)SA4 Seeds, 7 Days Post Anthesis17.14
S0821Sun1642 (sun-D)SA4 Pericarp, 10 Days Post Anthesis17.86
S0822Sun1642 (sun-D)SA4 Septum, 10 Days Post Anthesis23.03
S0823Sun1642 (sun-D)SA4 Seeds, 10 Days Post Anthesis16.82

Experiment: Transcriptome profiling of ripe fruits of S. lycopersicoides ILs
sample IDgenotype descriptionRPM
S0824VF36fruit, red ripe, VF366.91
S0825LA3882fruit, red ripe, S. lycopersicoides IL LA38827.18
S0826LA3886fruit, red ripe, S. lycopersicoides IL LA38866.91
S0827LA3892fruit, red ripe, S. lycopersicoides IL LA38929.21
S0828LA4230fruit, red ripe, S. lycopersicoides IL LA423010.29
S0829LA4231fruit, red ripe, S. lycopersicoides IL LA42317.18
S0830LA4232fruit, red ripe, S. lycopersicoides IL LA42328.3
S0831LA4233fruit, red ripe, S. lycopersicoides IL LA42335.76
S0832LA4234Afruit, red ripe, S. lycopersicoides IL LA4234A9.59
S0833LA4234Bfruit, red ripe, S. lycopersicoides IL LA4234B4.74
S0834LA4235fruit, red ripe, S. lycopersicoides IL LA42357.39
S0835LA4236Afruit, red ripe, S. lycopersicoides IL LA4236A7.37
S0836LA4237fruit, red ripe, S. lycopersicoides IL LA423710.21
S0837LA4238fruit, red ripe, S. lycopersicoides IL LA42386.17
S0838LA4239fruit, red ripe, S. lycopersicoides IL LA42398.71
S0839LA4241Afruit, red ripe, S. lycopersicoides IL LA4241A8.4
S0840LA4241Bfruit, red ripe, S. lycopersicoides IL LA4241B10.28
S0841LA4242Afruit, red ripe, S. lycopersicoides IL LA4242A6.54
S0842LA4242Bfruit, red ripe, S. lycopersicoides IL LA4242B11
S0843LA4242Cfruit, red ripe, S. lycopersicoides IL LA4242C9.08
S0844LA4243fruit, red ripe, S. lycopersicoides IL LA42437.26
S0845LA4244fruit, red ripe, S. lycopersicoides IL LA42446.19
S0846LA4245fruit, red ripe, S. lycopersicoides IL LA42456.15
S0847LA4247fruit, red ripe, S. lycopersicoides IL LA42477.27
S0848LA4248fruit, red ripe, S. lycopersicoides IL LA42485.19
S0849LA4249Afruit, red ripe, S. lycopersicoides IL LA4249A5.44
S0850LA4249Bfruit, red ripe, S. lycopersicoides IL LA4249B7.34
S0851LA4250Afruit, red ripe, S. lycopersicoides IL LA4250A9.32
S0852LA4250Bfruit, red ripe, S. lycopersicoides IL LA4250B8.28
S0853LA4250Cfruit, red ripe, S. lycopersicoides IL LA4250C7.79
S0854LA4251fruit, red ripe, S. lycopersicoides IL LA42516.51
S0855LA4252Afruit, red ripe, S. lycopersicoides IL LA4252A7.6
S0856LA4252Bfruit, red ripe, S. lycopersicoides IL LA4252B8.54
S0857LA4252Cfruit, red ripe, S. lycopersicoides IL LA4252C5.39
S0858LA4252Efruit, red ripe, S. lycopersicoides IL LA4252E7.74
S0859LA4252Ffruit, red ripe, S. lycopersicoides IL LA4252F5.98
S0860LA4253fruit, red ripe, S. lycopersicoides IL LA42537.31
S0861LA4254fruit, red ripe, S. lycopersicoides IL LA42546.37
S0862LA4255fruit, red ripe, S. lycopersicoides IL LA42556.27
S0863LA4256fruit, red ripe, S. lycopersicoides IL LA42565.77
S0864LA4257fruit, red ripe, S. lycopersicoides IL LA42576.96
S0865LA4258fruit, red ripe, S. lycopersicoides IL LA42587.09
S0866LA4260fruit, red ripe, S. lycopersicoides IL LA42604.55
S0867LA4262Afruit, red ripe, S. lycopersicoides IL LA4262A9.05
S0868LA4262Bfruit, red ripe, S. lycopersicoides IL LA4262B3.92
S0869LA4263Afruit, red ripe, S. lycopersicoides IL LA4263A5.13
S0870LA4263Bfruit, red ripe, S. lycopersicoides IL LA4263B6.57
S0871LA4263Cfruit, red ripe, S. lycopersicoides IL LA4263C4.28
S0872LA4263Dfruit, red ripe, S. lycopersicoides IL LA4263D3.44
S0873LA4264Afruit, red ripe, S. lycopersicoides IL LA4264A7.39
S0874LA4264Bfruit, red ripe, S. lycopersicoides IL LA4264B5.54
S0875LA4266Afruit, red ripe, S. lycopersicoides IL LA4266A5.37
S0876LA4266Bfruit, red ripe, S. lycopersicoides IL LA4266B7.92
S0877LA4268fruit, red ripe, S. lycopersicoides IL LA42686.32
S0878LA4269fruit, red ripe, S. lycopersicoides IL LA42694.97
S0879LA4270Afruit, red ripe, S. lycopersicoides IL LA4270A7.56
S0880LA4270Bfruit, red ripe, S. lycopersicoides IL LA4270B3.69
S0881LA4272fruit, red ripe, S. lycopersicoides IL LA42727.33
S0882LA4273fruit, red ripe, S. lycopersicoides IL LA42735.67
S0883LA4274fruit, red ripe, S. lycopersicoides IL LA42746.61
S0884LA4275fruit, red ripe, S. lycopersicoides IL LA42753.54
S0885LA4276Afruit, red ripe, S. lycopersicoides IL LA4276A5.68
S0886LA4276Bfruit, red ripe, S. lycopersicoides IL LA4276B4.18
S0887LA4276Cfruit, red ripe, S. lycopersicoides IL LA4276C4.79
S0888LA4276Dfruit, red ripe, S. lycopersicoides IL LA4276D2.82
S0889LA4277fruit, red ripe, S. lycopersicoides IL LA42777.97
S0890LA4277Bfruit, red ripe, S. lycopersicoides IL LA4277B9.19
S0891LA4277Cfruit, red ripe, S. lycopersicoides IL LA4277C7.94
S0892LA4278Afruit, red ripe, S. lycopersicoides IL LA4278A7.4
S0893LA4278Bfruit, red ripe, S. lycopersicoides IL LA4278B7.91
S0894LA4279fruit, red ripe, S. lycopersicoides IL LA42796.72
S0895LA4280fruit, red ripe, S. lycopersicoides IL LA42807.25
S0896LA4281Afruit, red ripe, S. lycopersicoides IL LA4281A9.62
S0897LA4281Bfruit, red ripe, S. lycopersicoides IL LA4281B5.87
S0898LA4281Cfruit, red ripe, S. lycopersicoides IL LA4281C8.56
S0899LA4281Dfruit, red ripe, S. lycopersicoides IL LA4281D8.16
S0900LA4281Efruit, red ripe, S. lycopersicoides IL LA4281E6.64
S0901LA4282Afruit, red ripe, S. lycopersicoides IL LA4282A6.53
S0902LA4282Bfruit, red ripe, S. lycopersicoides IL LA4282B7.14
S0903LA4282Cfruit, red ripe, S. lycopersicoides IL LA4282C7.95
S0904LA4284fruit, red ripe, S. lycopersicoides IL LA42845.09
S0905LA4294Afruit, red ripe, S. lycopersicoides IL LA4294A9.9
S0906LA4294Bfruit, red ripe, S. lycopersicoides IL LA4294B6.57
S0907LA4295fruit, red ripe, S. lycopersicoides IL LA42953.52
S0908LA4296fruit, red ripe, S. lycopersicoides IL LA42967.35
S0909LA4297fruit, red ripe, S. lycopersicoides IL LA42975.65
S0910LA4298fruit, red ripe, S. lycopersicoides IL LA42985.1
S0911LA4299fruit, red ripe, S. lycopersicoides IL LA42996.24
S0912LA4300Afruit, red ripe, S. lycopersicoides IL LA4300A5.03
S0913LA4300Bfruit, red ripe, S. lycopersicoides IL LA4300B1.27
S0914LA4301Afruit, red ripe, S. lycopersicoides IL LA4301A4.37
S0915LA4303fruit, red ripe, S. lycopersicoides IL LA43033.48
S0916LA4305fruit, red ripe, S. lycopersicoides IL LA43054.66
S0917LA4306Afruit, red ripe, S. lycopersicoides IL LA4306A4.65
S0918LA4306Bfruit, red ripe, S. lycopersicoides IL LA4306B3.2
S0919LA4307fruit, red ripe, S. lycopersicoides IL LA43072.67
S0920LA4308fruit, red ripe, S. lycopersicoides IL LA43086.68
S0921LA4308Afruit, red ripe, S. lycopersicoides IL LA4308A5.96
S0922LA4309fruit, red ripe, S. lycopersicoides IL LA43096.45
S0923LA4310fruit, red ripe, S. lycopersicoides IL LA431010.31
S0924LA4311fruit, red ripe, S. lycopersicoides IL LA43119.69
S0925LA4312Afruit, red ripe, S. lycopersicoides IL LA4312A9.38
S0926LA4312Bfruit, red ripe, S. lycopersicoides IL LA4312B8.16
S0927LA4313Afruit, red ripe, S. lycopersicoides IL LA4313A2.91
S0928LA4313Bfruit, red ripe, S. lycopersicoides IL LA4313B5.12

Experiment: Transcriptome profiling of ripe fruits of S. pimpinellifolium RILs
sample IDgenotype descriptionRPM
S0953LA2093fruit, red ripe, S. pimpinellifolium LA20937.47
S0954NCEBR1fruit, red ripe, S. lycopersicum NCEBR16.15
S0955RIL-1fruit, red ripe, S. pimpinellifolium RIL-16.02
S0956RIL-3fruit, red ripe, S. pimpinellifolium RIL-36.21
S0957RIL-4fruit, red ripe, S. pimpinellifolium RIL-46.03
S0958RIL-5fruit, red ripe, S. pimpinellifolium RIL-52.81
S0959RIL-6fruit, red ripe, S. pimpinellifolium RIL-64.33
S0960RIL-7fruit, red ripe, S. pimpinellifolium RIL-74.47
S0961RIL-11fruit, red ripe, S. pimpinellifolium RIL-116.27
S0962RIL-12fruit, red ripe, S. pimpinellifolium RIL-125.12
S0963RIL-13fruit, red ripe, S. pimpinellifolium RIL-136.38
S0964RIL-14fruit, red ripe, S. pimpinellifolium RIL-145.23
S0965RIL-16fruit, red ripe, S. pimpinellifolium RIL-166.45
S0966RIL-18fruit, red ripe, S. pimpinellifolium RIL-187.01
S0967RIL-19fruit, red ripe, S. pimpinellifolium RIL-195.47
S0968RIL-20fruit, red ripe, S. pimpinellifolium RIL-205.83
S0969RIL-21fruit, red ripe, S. pimpinellifolium RIL-214.94
S0970RIL-22fruit, red ripe, S. pimpinellifolium RIL-223.25
S0971RIL-23fruit, red ripe, S. pimpinellifolium RIL-234.06
S0972RIL-24fruit, red ripe, S. pimpinellifolium RIL-247.13
S0973RIL-25fruit, red ripe, S. pimpinellifolium RIL-259.47
S0974RIL-26fruit, red ripe, S. pimpinellifolium RIL-266.27
S0975RIL-27fruit, red ripe, S. pimpinellifolium RIL-277.46
S0976RIL-28fruit, red ripe, S. pimpinellifolium RIL-285.38
S0977RIL-30fruit, red ripe, S. pimpinellifolium RIL-308.04
S0978RIL-31fruit, red ripe, S. pimpinellifolium RIL-316.14
S0979RIL-32fruit, red ripe, S. pimpinellifolium RIL-324.35
S0980RIL-33fruit, red ripe, S. pimpinellifolium RIL-334.2
S0981RIL-34fruit, red ripe, S. pimpinellifolium RIL-345.96
S0982RIL-35fruit, red ripe, S. pimpinellifolium RIL-354.46
S0983RIL-37fruit, red ripe, S. pimpinellifolium RIL-375.1
S0984RIL-38fruit, red ripe, S. pimpinellifolium RIL-385.68
S0985RIL-39fruit, red ripe, S. pimpinellifolium RIL-396.95
S0986RIL-41fruit, red ripe, S. pimpinellifolium RIL-415.89
S0987RIL-43fruit, red ripe, S. pimpinellifolium RIL-433.6
S0988RIL-45fruit, red ripe, S. pimpinellifolium RIL-454.41
S0989RIL-47fruit, red ripe, S. pimpinellifolium RIL-475.32
S0990RIL-48fruit, red ripe, S. pimpinellifolium RIL-484.56
S0991RIL-49fruit, red ripe, S. pimpinellifolium RIL-496.14
S0992RIL-50fruit, red ripe, S. pimpinellifolium RIL-505.16
S0993RIL-52fruit, red ripe, S. pimpinellifolium RIL-522.6
S0994RIL-53fruit, red ripe, S. pimpinellifolium RIL-533.99
S0995RIL-54fruit, red ripe, S. pimpinellifolium RIL-544.58
S0996RIL-55fruit, red ripe, S. pimpinellifolium RIL-554.67
S0997RIL-56fruit, red ripe, S. pimpinellifolium RIL-566.29
S0998RIL-57fruit, red ripe, S. pimpinellifolium RIL-576.86
S0999RIL-58fruit, red ripe, S. pimpinellifolium RIL-584.18
S1000RIL-62fruit, red ripe, S. pimpinellifolium RIL-623.8
S1001RIL-63fruit, red ripe, S. pimpinellifolium RIL-634.32
S1002RIL-65fruit, red ripe, S. pimpinellifolium RIL-653.62
S1003RIL-66fruit, red ripe, S. pimpinellifolium RIL-663.05
S1004RIL-67fruit, red ripe, S. pimpinellifolium RIL-673.18
S1005RIL-68fruit, red ripe, S. pimpinellifolium RIL-683.31
S1006RIL-69fruit, red ripe, S. pimpinellifolium RIL-692.98
S1007RIL-71fruit, red ripe, S. pimpinellifolium RIL-715.6
S1008RIL-72fruit, red ripe, S. pimpinellifolium RIL-727.05
S1009RIL-73fruit, red ripe, S. pimpinellifolium RIL-735.2
S1010RIL-75fruit, red ripe, S. pimpinellifolium RIL-755.33
S1011RIL-76fruit, red ripe, S. pimpinellifolium RIL-764.36
S1012RIL-77fruit, red ripe, S. pimpinellifolium RIL-774.11
S1013RIL-78fruit, red ripe, S. pimpinellifolium RIL-784.42
S1014RIL-79fruit, red ripe, S. pimpinellifolium RIL-795.94
S1015RIL-80fruit, red ripe, S. pimpinellifolium RIL-804.1
S1016RIL-81fruit, red ripe, S. pimpinellifolium RIL-817
S1017RIL-84fruit, red ripe, S. pimpinellifolium RIL-846.98
S1018RIL-85fruit, red ripe, S. pimpinellifolium RIL-856.4
S1019RIL-88fruit, red ripe, S. pimpinellifolium RIL-885.7
S1020RIL-90fruit, red ripe, S. pimpinellifolium RIL-904.57
S1021RIL-91fruit, red ripe, S. pimpinellifolium RIL-913.78
S1022RIL-95fruit, red ripe, S. pimpinellifolium RIL-953.53
S1023RIL-96fruit, red ripe, S. pimpinellifolium RIL-965.17
S1024RIL-97fruit, red ripe, S. pimpinellifolium RIL-975.75
S1025RIL-98fruit, red ripe, S. pimpinellifolium RIL-986.74
S1026RIL-99fruit, red ripe, S. pimpinellifolium RIL-996.67
S1027RIL-100fruit, red ripe, S. pimpinellifolium RIL-1005.35
S1028RIL-101fruit, red ripe, S. pimpinellifolium RIL-1014.43
S1029RIL-102fruit, red ripe, S. pimpinellifolium RIL-1025.11
S1030RIL-103fruit, red ripe, S. pimpinellifolium RIL-1034.29
S1031RIL-105fruit, red ripe, S. pimpinellifolium RIL-1053.38
S1032RIL-107fruit, red ripe, S. pimpinellifolium RIL-1073.6
S1033RIL-108fruit, red ripe, S. pimpinellifolium RIL-1083.66
S1034RIL-109fruit, red ripe, S. pimpinellifolium RIL-1095.7
S1035RIL-111fruit, red ripe, S. pimpinellifolium RIL-1114.25
S1036RIL-112fruit, red ripe, S. pimpinellifolium RIL-1123.51
S1037RIL-113fruit, red ripe, S. pimpinellifolium RIL-1134.05
S1038RIL-114fruit, red ripe, S. pimpinellifolium RIL-1144.3
S1039RIL-115fruit, red ripe, S. pimpinellifolium RIL-1154.49
S1040RIL-116fruit, red ripe, S. pimpinellifolium RIL-1164.07
S1041RIL-117fruit, red ripe, S. pimpinellifolium RIL-1173.98
S1042RIL-118fruit, red ripe, S. pimpinellifolium RIL-1184
S1043RIL-120fruit, red ripe, S. pimpinellifolium RIL-1206.69
S1044RIL-121fruit, red ripe, S. pimpinellifolium RIL-1216.27
S1045RIL-122fruit, red ripe, S. pimpinellifolium RIL-1223.69
S1046RIL-123fruit, red ripe, S. pimpinellifolium RIL-1235.69
S1047RIL-124fruit, red ripe, S. pimpinellifolium RIL-1246.17
S1048RIL-125fruit, red ripe, S. pimpinellifolium RIL-1256.23
S1049RIL-126fruit, red ripe, S. pimpinellifolium RIL-1262.84
S1050RIL-128fruit, red ripe, S. pimpinellifolium RIL-1285.12
S1051RIL-129fruit, red ripe, S. pimpinellifolium RIL-1296.17
S1052RIL-130fruit, red ripe, S. pimpinellifolium RIL-1304.82
S1053RIL-131fruit, red ripe, S. pimpinellifolium RIL-1314.04
S1054RIL-132fruit, red ripe, S. pimpinellifolium RIL-1323.49
S1055RIL-133fruit, red ripe, S. pimpinellifolium RIL-1334.7
S1056RIL-134fruit, red ripe, S. pimpinellifolium RIL-1344.1
S1057RIL-135fruit, red ripe, S. pimpinellifolium RIL-1354.9
S1058RIL-137fruit, red ripe, S. pimpinellifolium RIL-1374.92
S1059RIL-139fruit, red ripe, S. pimpinellifolium RIL-1393.8
S1060RIL-140fruit, red ripe, S. pimpinellifolium RIL-1402.5
S1061RIL-142fruit, red ripe, S. pimpinellifolium RIL-1423.26
S1062RIL-143fruit, red ripe, S. pimpinellifolium RIL-1433.7
S1063RIL-144fruit, red ripe, S. pimpinellifolium RIL-1443.2
S1064RIL-145fruit, red ripe, S. pimpinellifolium RIL-1455.84
S1065RIL-146fruit, red ripe, S. pimpinellifolium RIL-1464.5
S1066RIL-147fruit, red ripe, S. pimpinellifolium RIL-1475.36
S1067RIL-148fruit, red ripe, S. pimpinellifolium RIL-1484.16
S1068RIL-149fruit, red ripe, S. pimpinellifolium RIL-1492.85
S1069RIL-150fruit, red ripe, S. pimpinellifolium RIL-1504.62
S1070RIL-151fruit, red ripe, S. pimpinellifolium RIL-1514.63
S1071RIL-152fruit, red ripe, S. pimpinellifolium RIL-1525.73
S1072RIL-153fruit, red ripe, S. pimpinellifolium RIL-1536.61
S1073RIL-154fruit, red ripe, S. pimpinellifolium RIL-1545.4
S1074RIL-155fruit, red ripe, S. pimpinellifolium RIL-1556.44
S1075RIL-156fruit, red ripe, S. pimpinellifolium RIL-1564.09
S1076RIL-159fruit, red ripe, S. pimpinellifolium RIL-1593.57
S1077RIL-160fruit, red ripe, S. pimpinellifolium RIL-1605.18
S1078RIL-161fruit, red ripe, S. pimpinellifolium RIL-1614.81
S1079RIL-162fruit, red ripe, S. pimpinellifolium RIL-1624.71
S1080RIL-164fruit, red ripe, S. pimpinellifolium RIL-1645.63
S1081RIL-165fruit, red ripe, S. pimpinellifolium RIL-1654.65
S1082RIL-167fruit, red ripe, S. pimpinellifolium RIL-1674.2
S1083RIL-168fruit, red ripe, S. pimpinellifolium RIL-1686.18
S1084RIL-169fruit, red ripe, S. pimpinellifolium RIL-1697.62
S1085RIL-171fruit, red ripe, S. pimpinellifolium RIL-17111.18
S1086RIL-172fruit, red ripe, S. pimpinellifolium RIL-17210.41

Experiment: Transcriptome profiling of fruit of cultivated and wild tomatoes
sample IDgenotype descriptionRPM
S1107LA0816 (VF-145)LA0816 immature green fruit23.61
S1108LA0816 (VF-145)LA0816 mature green fruit22.33
S1109LA0816 (VF-145)LA0816 breaker fruit29.66
S1110LA0816 (VF-145)LA0816 ripe fruit40.26
S1111LA1563LA1563 immature green fruit15.06
S1112LA1563LA1563 mature green fruit16.52
S1113LA1563LA1563 breaker fruit24.04
S1114LA1563LA1563 ripe fruit31.67
S1115BD-MPBD-MP immature green fruit21.98
S1116BD-MPBD-MP mature green fruit21.96
S1117BD-MPBD-MP breaker fruit34.75
S1118BD-MPBD-MP ripe fruit37.48
S1119BD-MTBD-MT immature green fruit15.49
S1120BD-MTBD-MT mature green fruit21.04
S1121BD-MTBD-MT breaker fruit27.38
S1122BD-MTBD-MT ripe fruit45.92
S1123LA1306LA1306 immature green fruit5.98
S1124LA1306LA1306 mature green fruit8.38
S1125LA1306LA1306 breaker fruit9.16
S1126LA1306LA1306 ripe fruit10.41
S1127LA1412LA1412 immature green fruit4.4
S1128LA1412LA1412 mature green fruit7.47
S1129LA1412LA1412 breaker fruit7.29
S1130LA1412LA1412 ripe fruit15.58
S1131LA1586LA1586 immature green fruit2.6
S1132LA1586LA1586 mature green fruit5.28
S1133LA1586LA1586 breaker fruit13.93
S1134LA1586LA1586 ripe fruit7.39
S1135LA1589LA1589 immature green fruit5.42
S1136LA1589LA1589 mature green fruit9.03
S1137LA1589LA1589 breaker fruit11.1
S1138LA1589LA1589 ripe fruit20.2
S1139LA1028LA1028 immature green fruit10.87
S1141LA1028LA1028 breaker fruit14.28
S1142LA1028LA1028 ripe fruit18.95
S1143LA1318LA1318 immature green fruit14.56
S1144LA1318LA1318 mature green fruit9.49
S1145LA1318LA1318 breaker fruit12.91
S1146LA1318LA1318 ripe fruit13.97
S1147BD-732BD-732 immature green fruit11.33
S1148BD-732BD-732 mature green fruit21.8
S1149BD-732BD-732 breaker fruit13.24
S1150BD-732BD-732 ripe fruit13.76
S1151LA0407LA0407 immature green fruit10.34
S1152LA0407LA0407 mature green fruit9.73
S1153LA0407LA0407 breaker fruit27.21
S1154LA0407LA0407 ripe fruit11.33
S1155LA1777LA1777 immature green fruit9.37
S1156LA1777LA1777 mature green fruit13
S1157LA1777LA1777 breaker fruit12.3
S1158LA1777LA1777 ripe fruit17.28
S1159LA0716LA0716 immature green fruit7.9
S1160LA0716LA0716 mature green fruit21.05
S1161LA0716LA0716 breaker fruit6.23
S1162LA0716LA0716 ripe fruit18.79
S1163PI126431PI126431 immature green fruit13.97
S1164PI126431PI126431 mature green fruit10.42
S1165PI126431PI126431 breaker fruit10.45
S1166PI126431PI126431 ripe fruit10.92
S1167PI126926PI126926 immature green fruit6.04
S1168PI126926PI126926 mature green fruit19.35
S1169PI126926PI126926 breaker fruit10.53
S1170PI126926PI126926 ripe fruit11.83
S1171LA1584LA1584 ripe fruit19.86
S1172LA2173LA2173 ripe fruit22.78
S1173LA1301LA1301 ripe fruit25.84
S1174LA1335LA1335 ripe fruit21.83
S1175LA1371LA1371 ripe fruit21.18
S1176LA1521LA1521 ripe fruit23.41
S1177LA1659LA1659 ripe fruit22.39
S1178LA0722LA0722 ripe fruit24.67
S1179LA1547LA1547 ripe fruit25.2
S1180LA3123LA3123 ripe fruit25.61
S1181LA2096LA2096 ripe fruit21.87
S1182LA1246LA1246 ripe fruit20.29
S1183LA1259LA1259 ripe fruit20.45
S1184LA2093LA2093 ripe fruit18.73
S1185LA0418LA0418 ripe fruit23.7
S1186LA2850LA2850 ripe fruit24.55
S1187LA1043LA1043 ripe fruit20.26
S1188LA0438LA0438 ripe fruit39.84
S1189LA0532LA0532 ripe fruit33.55
S1190LA1044LA1044 ripe fruit32.71
S1191LA1452LA1452 ripe fruit44.47
S1192LA0528LA0528 ripe fruit34.29
S1193LA0530LA0530 ripe fruit38.01
S1194LA0480ALA0480A ripe fruit46.6
S1195LA0521LA0521 ripe fruit23.9
S1196LA0422LA0422 ripe fruit26.85
S1197LA0529LA0529 ripe fruit26.73
S1198LA1039LA1039 ripe fruit35.15
S1199LA1042LA1042 ripe fruit28.66
S1200LA1407LA1407 ripe fruit24.56
S1201LA1035LA1035 ripe fruit19.48