Solyc03g098610 expression

Experiment: Transcriptome profiling of pennellii ILs
sample IDgenotype descriptionRPM
S0001M82fruit, red ripe, M823.6
S00021-1fruit, red ripe, S. pennellii IL1-13.95
S00031-1-2fruit, red ripe, S. pennellii IL1-1-23.77
S00041-1-3fruit, red ripe, S. pennellii IL1-1-34.06
S00051-2fruit, red ripe, S. pennellii IL1-23.44
S00061-3fruit, red ripe, S. pennellii IL1-34.09
S00071-4fruit, red ripe, S. pennellii IL1-42.37
S00081-4-18fruit, red ripe, S. pennellii IL1-4-183.78
S00092-1fruit, red ripe, S. pennellii IL2-12.45
S00102-1-1fruit, red ripe, S. pennellii IL2-1-14.29
S00112-2fruit, red ripe, S. pennellii IL2-22.95
S00122-3fruit, red ripe, S. pennellii IL2-33.34
S00132-4fruit, red ripe, S. pennellii IL2-43.48
S00142-5fruit, red ripe, S. pennellii IL2-54.77
S00152-6fruit, red ripe, S. pennellii IL2-64.71
S00162-6-5fruit, red ripe, S. pennellii IL2-6-53.35
S00173-1fruit, red ripe, S. pennellii IL3-13.12
S00183-2fruit, red ripe, S. pennellii IL3-23.95
S00203-4fruit, red ripe, S. pennellii IL3-43.61
S00213-5fruit, red ripe, S. pennellii IL3-52.8
S00224-1fruit, red ripe, S. pennellii IL4-14.27
S00234-1-1fruit, red ripe, S. pennellii IL4-1-14.29
S00244-2fruit, red ripe, S. pennellii IL4-23.75
S00254-3fruit, red ripe, S. pennellii IL4-34.06
S00264-3-2fruit, red ripe, S. pennellii IL4-3-24.46
S00274-4fruit, red ripe, S. pennellii IL4-44.66
S00285-1fruit, red ripe, S. pennellii IL5-13.46
S00295-2fruit, red ripe, S. pennellii IL5-23.86
S00305-3fruit, red ripe, S. pennellii IL5-34.94
S00315-4fruit, red ripe, S. pennellii IL5-42.57
S00325-5fruit, red ripe, S. pennellii IL5-54.21
S00346-2fruit, red ripe, S. pennellii IL6-22.67
S00356-2-2fruit, red ripe, S. pennellii IL6-2-23.06
S00366-3fruit, red ripe, S. pennellii IL6-35.28
S00376-4fruit, red ripe, S. pennellii IL6-45.85
S00387-1fruit, red ripe, S. pennellii IL7-14.12
S00397-2fruit, red ripe, S. pennellii IL7-23.22
S00407-3fruit, red ripe, S. pennellii IL7-34.26
S00417-4fruit, red ripe, S. pennellii IL7-43.75
S00427-4-1fruit, red ripe, S. pennellii IL7-4-13.82
S00437-5fruit, red ripe, S. pennellii IL7-54.27
S00447-5-5fruit, red ripe, S. pennellii IL7-5-54.48
S00458-1fruit, red ripe, S. pennellii IL8-13.42
S00468-1-1fruit, red ripe, S. pennellii IL8-1-14.82
S00478-1-5fruit, red ripe, S. pennellii IL8-1-54.22
S00488-2fruit, red ripe, S. pennellii IL8-23.35
S00498-2-1fruit, red ripe, S. pennellii IL8-2-12.64
S00508-3fruit, red ripe, S. pennellii IL8-32.7
S00518-3-1fruit, red ripe, S. pennellii IL8-3-13.05
S00529-1fruit, red ripe, S. pennellii IL9-14.61
S00539-1-2fruit, red ripe, S. pennellii IL9-1-24.92
S00549-1-3fruit, red ripe, S. pennellii IL9-1-34.09
S00559-2fruit, red ripe, S. pennellii IL9-24.38
S00569-2-5fruit, red ripe, S. pennellii IL9-2-54.3
S00579-2-6fruit, red ripe, S. pennellii IL9-2-63.74
S00589-3fruit, red ripe, S. pennellii IL9-33.66
S00599-3-1fruit, red ripe, S. pennellii IL9-3-12.93
S00609-3-2fruit, red ripe, S. pennellii IL9-3-23.35
S006110-1fruit, red ripe, S. pennellii IL10-12.81
S006210-1-1fruit, red ripe, S. pennellii IL10-1-13.98
S006310-2fruit, red ripe, S. pennellii IL10-24.19
S006410-2-2fruit, red ripe, S. pennellii IL10-2-21.98
S006510-3fruit, red ripe, S. pennellii IL10-34.62
S006611-1fruit, red ripe, S. pennellii IL11-11.74
S006711-2fruit, red ripe, S. pennellii IL11-25.51
S006811-3fruit, red ripe, S. pennellii IL11-34.58
S006911-4fruit, red ripe, S. pennellii IL11-43.66
S007011-4-1fruit, red ripe, S. pennellii IL11-4-13.51
S007112-1fruit, red ripe, S. pennellii IL12-11.68
S007212-1-1fruit, red ripe, S. pennellii IL12-1-12.5
S007312-2fruit, red ripe, S. pennellii IL12-23.81
S007412-3fruit, red ripe, S. pennellii IL12-32.8
S007512-3-1fruit, red ripe, S. pennellii IL12-3-13.77
S007612-4fruit, red ripe, S. pennellii IL12-44.22
S007712-4-1fruit, red ripe, S. pennellii IL12-4-13.64

Experiment: Transcriptome analysis of various tissues in tomato cultivar Heinz and the wild relative Solanum pimpinellifolium
sample IDgenotype descriptionRPM
S0584HeinzHeinz unopened flower buds8.32
S0585HeinzHeinz fully opened flowers4.05
S0586HeinzHeinz 1 cm fruits5.87
S0587HeinzHeinz 2 cm fruits5.71
S0588HeinzHeinz 3 cm fruits3.5
S0589HeinzHeinz mature green fruits4.44
S0590HeinzHeinz breaker fruits2.73
S0591HeinzHeinz breaker+10 fruits8.23
S0592HeinzHeinz roots5.93
S0593HeinzHeinz leaves6.73
S0594pimpinellifolium immature green fruits3.65
S0595pimpinellifolium breaker fruits3.35
S0596pimpinellifolium breaker+5 fruits2.9
S0597pimpinellifolium leaves9.92

Experiment: Transcriptome profiling of young flower buds of WT, sun, ovate and fs8.1 NILs in the LA1589 background
sample IDgenotype descriptionRPM
S0929LA1589LA1589 young flower buds at 4 days post-initiation of floral meristem17.99
S0930LA1589LA1589 young flower buds at 6 days post-initiation of floral meristem16.66
S0931LA1589LA1589 young flower buds at 8 days post-initiation of floral meristem18.87
S0932LA1589LA1589 young flower buds at 10 days post-initiation of floral meristem21.49
S0933LA1589LA1589 young flower buds at 13 days post-initiation of floral meristem16.17
S0934LA1589LA1589 young flower buds at 16 days post-initiation of floral meristem18.12
S0935sun NIL in the LA1589 backgroundsun young flower buds at 4 days post-initiation of floral meristem19.01
S0936sun NIL in the LA1589 backgroundsun young flower buds at 6 days post-initiation of floral meristem17.95
S0937sun NIL in the LA1589 backgroundsun young flower buds at 8 days post-initiation of floral meristem17.73
S0938sun NIL in the LA1589 backgroundsun young flower buds at 10 days post-initiation of floral meristem23.44
S0939sun NIL in the LA1589 backgroundsun young flower buds at 13 days post-initiation of floral meristem16.92
S0940sun NIL in the LA1589 backgroundsun young flower buds at 16 days post-initiation of floral meristem19.97
S0941ovate NIL in the LA1589 backgroundovate young flower buds at 4 days post-initiation of floral meristem18.26
S0942ovate NIL in the LA1589 backgroundovate young flower buds at 6 days post-initiation of floral meristem17.2
S0943ovate NIL in the LA1589 backgroundovate young flower buds at 8 days post-initiation of floral meristem20.05
S0944ovate NIL in the LA1589 backgroundovate young flower buds at 10 days post-initiation of floral meristem23.05
S0945ovate NIL in the LA1589 backgroundovate young flower buds at 13 days post-initiation of floral meristem16.21
S0946ovate NIL in the LA1589 backgroundovate young flower buds at 16 days post-initiation of floral meristem17.75
S0947fs8.1 NIL in the LA1589 backgroundfs8.1 young flower buds at 4 days post-initiation of floral meristem18.38
S0948fs8.1 NIL in the LA1589 backgroundfs8.1 young flower buds at 6 days post-initiation of floral meristem17.23
S0949fs8.1 NIL in the LA1589 backgroundfs8.1 young flower buds at 8 days post-initiation of floral meristem18.42
S0950fs8.1 NIL in the LA1589 backgroundfs8.1 young flower buds at 10 days post-initiation of floral meristem22.31
S0951fs8.1 NIL in the LA1589 backgroundfs8.1 young flower buds at 13 days post-initiation of floral meristem16.69
S0952fs8.1 NIL in the LA1589 backgroundfs8.1 young flower buds at 16 days post-initiation of floral meristem16.45

Experiment: Transcriptome analysis of various tissues in wild species S. pimpinellifolium, LA1589
sample IDgenotype descriptionRPM
S0608LA1589anthesis flowers (0DPA)8.34
S0609LA158910 days post anthesis fruit (10 DPA1)8.19
S0610LA158910 days post anthesis fruit 2 (10 DPA2)7.8
S0611LA158920 days post anthesis fruit (20DPA)7.13
S0612LA1589rippening fruit (33DPA)3.64
S0613LA1589cotyledons (COTYL)9.83
S0614LA1589hypocotyl (HYPO)10.38
S0615LA1589vegitative meristems (MERI)14.49
S0616LA1589mature leaves (ML)9.17
S0617LA1589whole root (ROOT)4.52
S0618LA1589young flower buds (YFB)19.09
S0619LA1589young leaves (YL)23.03

Experiment: Transcriptome sequencing of tomato leaves treated with different bacteria and PAMPs
sample IDgenotype descriptionRPM
S0620Rio Grande prf3 (deletion in Prf)mock PAMPs 30 min4.97
S0621Rio Grande prf3 (deletion in Prf)cold shock protein 22 (csp22) 30 min3.34
S0622Rio Grande prf3 (deletion in Prf)flagellin 22 (flg22) 30 min4.32
S0623Rio Grande prf3 (deletion in Prf)flagellin II-28 (flgII-28) 30 min3.95
S0624Rio Grande prf3 (deletion in Prf)Lipopolysaccharides (LPS) 30 min4.23
S0625Rio Grande prf3 (deletion in Prf)Peptidoglycan (PGN) 30 min4.31
S0626Rio Grande prf3 (deletion in Prf)mock PAMPs 6h11.71
S0627Rio Grande prf3 (deletion in Prf)cold shock protein 22 (csp22) 6 h9.15
S0628Rio Grande prf3 (deletion in Prf)flagellin 22 (flg22) 6h10.46
S0629Rio Grande prf3 (deletion in Prf)flagellin II-28 (flgII-28) 6h7.42
S0630Rio Grande prf3 (deletion in Prf)Lipopolysaccharides (LPS) 6 h11.34
S0631Rio Grande prf3 (deletion in Prf)Peptidoglycan (PGN) 6h 11.72
S0632Rio Grande prf3 (deletion in Prf)mock bacteria 30 min4.36
S0633Rio Grande prf3 (deletion in Prf)DC3000 30 min5.11
S0634Rio Grande prf3 (deletion in Prf)DC3000ΔhrcQ-U 30 min4.78
S0635Rio Grande prf3 (deletion in Prf)DC3000ΔhrcQ-UΔfliC 30 min4.58
S0636Rio Grande prf3 (deletion in Prf)DC3000Δ28 30 min4.41
S0637Rio Grande prf3 (deletion in Prf)DC3000ΔAvrPtoΔAvrPtoB 30 min4.7
S0638Rio Grande prf3 (deletion in Prf)Pseudomonas fluorescens 30 min4.97
S0639Rio Grande prf3 (deletion in Prf)Pseudomonas putida 30 min4.32
S0640Rio Grande prf3 (deletion in Prf)Agrobacterium tumefaciens 30 min4.89
S0641Rio Grande prf3 (deletion in Prf)mock bacteria 6 h11.65
S0642Rio Grande prf3 (deletion in Prf)DC3000 6 h9.45
S0643Rio Grande prf3 (deletion in Prf)DC3000ΔhrcQ-U 6 h8.77
S0644Rio Grande prf3 (deletion in Prf)DC3000ΔhrcQ-UΔfliC 6 h10.3
S0645Rio Grande prf3 (deletion in Prf)DC3000Δ28 6 h7.41
S0646Rio Grande prf3 (deletion in Prf)DC3000ΔAvrPtoΔAvrPtoB 6 h7.39
S0647Rio Grande prf3 (deletion in Prf)Pseudomonas fluorescens 6 h7.66
S0648Rio Grande prf3 (deletion in Prf)Pseudomonas putida 6 h6.91
S0649Rio Grande prf3 (deletion in Prf)Agrobacterium tumefaciens 6 h12.12

Experiment: Transcriptome or gene expression of various fruit tissue in FW3.2 NILs
sample IDgenotype descriptionRPM
S0671Yellow Stuffer (cultivated allele of fw3.2)fw3.2(ys) 5 Days Post Anthesis Pericarp10.72
S0672Yellow Stuffer (wild allele of fw3.2)fw3.2(wt) 5 Days Post Anthesis Pericarp11.17
S0673Yellow Stuffer (cultivated allele of fw3.2)fw3.2(ys) 7 Days Post Anthesis Pericarp8.96
S0674Yellow Stuffer (wild allele of fw3.2)fw3.2(wt) 7 Days Post Anthesis Pericarp9.31
S0675Yellow Stuffer (cultivated allele of fw3.2)fw3.2(ys) 10 Days Post Anthesis Pericarp7.1
S0676Yellow Stuffer (wild allele of fw3.2)fw3.2(wt) 10 Days Post Anthesis Pericarp6.29
S0677Yellow Stuffer (cultivated allele of fw3.2)fw3.2(ys) 5 Days Post Anthesis Seed13.02
S0678Yellow Stuffer (wild allele of fw3.2)fw3.2(wt) 5 Days Post Anthesis Seed12.92
S0679Yellow Stuffer (cultivated allele of fw3.2)fw3.2(ys) 7 Days Post Anthesis Seed9.87
S0680Yellow Stuffer (wild allele of fw3.2)fw3.2(wt) 7 Days Post Anthesis Seed10.12
S0681Yellow Stuffer (cultivated allele of fw3.2)fw3.2(ys) 10 Days Post Anthesis Seed8.22
S0682Yellow Stuffer (wild allele of fw3.2)fw3.2(wt) 10 Days Post Anthesis Seed8.03
S0683Yellow Stuffer (cultivated allele of fw3.2)fw3.2(ys) young flower bud13.4
S0684Yellow Stuffer (wild allele of fw3.2)fw3.2(wt) young flower bud12.7

Experiment: Tissue-specific transcriptome profiling of Solanum pimpinellifolium ovaries and fruit using LCM-coupled to RNA-seq
sample IDgenotype descriptionRPM
S0685LA1589LA1589, Ovule 0 dpa (SA1_D0_OV)5.95
S0686sunsun, Ovule 0 dpa (SA2_D0_OV)6.92
S0687LA1589LA1589, Placenta 0 dpa (SA1_D0_PL)9.73
S0688sunsun, Placenta 0 dpa (SA2_D0_PL)7.72
S0689LA1589LA1589, Septum 0 dpa (SA1_D0_SE)9.03
S0690sunsun, Septum 0 dpa (SA2_D0_SE)10.78
S0691LA1589LA1589, Pericarp 0 dpa (SA1_D0_PE)10.42
S0692sunsun, Pericarp 0 dpa (SA2_D0_PE)7.64
S0693LA1589LA1589, Embryo 4 dpa Fruit (SA1_D4_EM)9.39
S0694sunsun, Embryo 4 dpa Fruit (SA2_D4_EM)10.54
S0695LA1589LA1589, Endosperm 4 dpa Fruit (SA1_D4_ENDO)10.78
S0696sunsun, Endosperm 4 dpa Fruit (SA2_D4_ENDO)15.93
S0697LA1589LA1589, Seed Coat 4 dpa Fruit (SA1_D4_SC)20.46
S0698sunsun, Seed Coat 4 dpa Fruit (SA2_D4_SC)17.83
S0699LA1589LA1589, Funiculus 4 dpa Fruit (SA1_D4_FU)13.41
S0700sunsun, Funiculus 4 dpa Fruit (SA2_D4_FU)12.31
S0701LA1589LA1589, Placenta 4 dpa Fruit (SA1_D4_PL)19.32
S0702sunsun, Placenta 4 dpa Fruit (SA2_D4_PL)16.58
S0703LA1589LA1589, Septum 4 dpa Fruit (SA1_D4_SE)15.78
S0704sunsun, Septum 4 dpa Fruit (SA2_D4_SE)13.63
S0705LA1589LA1589, Pericarp 4 dpa Fruit (SA1_D4_PE)14.63
S0706sunsun, Pericarp 4 dpa Fruit (SA2_D4_PE)13.42

Experiment: Transcriptome sequencing of leaves of resistant (RG-PtoR) and susceptible (RG-prf3 and RG-prf19) tomato plants treated with Pst DC3000
sample IDgenotype descriptionRPM
S0740Rio Grande-PtoRDC3000 4 h1.3
S0741Rio Grande-prf3DC3000 4 h5.17
S0742Rio Grande-prf19DC3000 4 h5.66
S0743Rio Grande-PtoRDC3000 6 h2.32
S0744Rio Grande-prf3DC3000 6 h6.51
S0745Rio Grande-prf19DC3000 6 h7.96

Experiment: Transcriptome sequencing of tomato leaves trated with diferent Pst DC3000 mutant strains
sample IDgenotype descriptionRPM
S0746Rio Grande-PtoRDC3000ΔhopQ1-1 ΔfliC 6 h5.05
S0747Rio Grande-PtoRDC3000ΔhopQ1-1 ΔavrPto ΔavrPtoB 6 h7.49
S0748Rio Grande-PtoRDC3000ΔhopQ1-1 ΔavrPto ΔavrPtoB ΔfliC 6 h8.65

Experiment: Transcriptome profiling of anthesis-stage ovaries from the fs8.1 backcrossed lines in Rio Grande background
sample IDgenotype descriptionRPM
S0749fs8.1, backcrossed line 09S204, BC4F2, Rio Grande background09S204-ee, ovary(anthesis)9.94
S0750WT, backcrossed line 09S204, BC4F2, Rio Grande background09S204-pp, ovary(anthesis)8.97
S0751fs8.1, backcrossed line 09S236, BC3F2, Rio Grande background09S236-ee, ovary(anthesis)9.08
S0752WT, backcrossed line 09S236, BC3F2, Rio Grande background09S236-pp, ovary(anthesis)8.83
S0753fs8.1, backcrossed line 09S237, BC1F4, Rio Grande background09S237-ee, ovary(anthesis)9.86
S0754WT, backcrossed line 09S237, BC1F4, Rio Grande background09S237-pp, ovary(anthesis)9.42

Experiment: Domain-wise effect of AvrPto on the tomato transcriptome 6 hours post inoculation
sample IDgenotype descriptionRPM
S0755Rio Grande-prf3D28E (pCPP45::avrPto) 6 h8.67
S0756Rio Grande-prf3D28E (pCPP45::avrPto I96A) 6 h6.28
S0757Rio Grande-prf3D28E (pCPP45::avrPto 2xA) 6 h7.44
S0758Rio Grande-prf3D28E (pCPP45::avrPto I96A + 2xA) 6 h5.13
S0759Rio Grande-prf3Mock 6 h10.75

Experiment: Transcriptome sequencing of Pti1 silenced plants after treatment of Pst DC3000ΔAvrPtoΔAvrPtoB
sample IDgenotype descriptionRPM
S0658Rio Grande prf3 (deletion in Prf)Azygous of hpPti1 DC3000ΔAvrPtoΔAvrPtoB 3 h7.72
S0659Rio Grande prf3 (deletion in Prf)hpPti1-F10 DC3000ΔAvrPtoΔAvrPtoB 3 h 8.92
S0660Rio Grande prf3 (deletion in Prf)hpPti1-F27 DC3000ΔAvrPtoΔAvrPtoB 3 h8.2
S0661Rio Grande prf3 (deletion in Prf)Azygous of hpPti1 DC3000ΔAvrPtoΔAvrPtoB 6 h7.89
S0662Rio Grande prf3 (deletion in Prf), hairpin Pti1, line F10hpPti1-F10 DC3000ΔAvrPtoΔAvrPtoB 6 h8.3
S0663Rio Grande prf3 (deletion in Prf), hairpin Pti1, line F27hpPti1-F27 ΔAvrPtoΔAvrPtoB 6 h8.11

Experiment: Gene expression in IM/FM, 2 dpi, 4 dpi and 6 dpi floral buds of wild type, lc, fas and lc/fas in the LA1589 background
sample IDgenotype descriptionRPM
S1087LA15892dpi floral buds51.06
S1088lc2dpi floral buds53.44
S1089fas2dpi floral buds51.91
S1090lc/fas2dpi floral buds52.23
S1091LA15894dpi floral buds61.38
S1092lc4dpi floral buds53.24
S1093fas4dpi floral buds58.36
S1094lc/fas4dpi floral buds53.01
S1095LA15896dpi floral buds53.97
S1096lc6dpi floral buds49.27
S1097fas6dpi floral buds52.53
S1098lc/fas6dpi floral buds49.84
S1099LA1589floral and inflorescence meristem50.26
S1100lcfloral and inflorescence meristem48.55
S1101fasfloral and inflorescence meristem53.72
S1102lc/fasfloral and inflorescence meristem52.28
S1103LA1589sympodial shoot apical meristem52.38
S1104lcsympodial shoot apical meristem44.07
S1105fassympodial shoot apical meristem48.78
S1106lc/fassympodial shoot apical meristem54.41

Experiment: RNA-Seq analysis on tomato anthesis flowers of ovate/sov1 NILs in the LA1589 background
sample IDgenotype descriptionRPM
S0764LA1589LA1589, flowers16.64
S0765ovateovate, flowers18.95
S0766sov1sov1, flowers17.22
S0767ovate/sov1ovate/sov1, flowers22.18

Experiment: Transcriptome profiling of three fruit tissues from the fw11.3 NILs in cultivated background
sample IDgenotype descriptionRPM
S0768Rio Grande (fw11.3-D)fw11.3-D Pericarp, 10 Days Post Anthesis11.04
S0769Rio Grande (fw11.3-D)fw11.3-D Septum and Placenta, 10 Days Post Anthesis11.07
S0770Rio Grande (fw11.3-D)fw11.3-D Columella, 10 Days Post Anthesis12.48
S0771Rio Grande (fw11.3-D)fw11.3-D Pericarp, 15 Days Post Anthesis9.31
S0772Rio Grande (fw11.3-D)fw11.3-D Septum and Placenta, 15 Days Post Anthesis11.16
S0773Rio Grande (fw11.3-D)fw11.3-D Columella, 15 Days Post Anthesis10.73
S0774Rio Grande (fw11.3-D)fw11.3-D Pericarp, 25 Days Post Anthesis6.99
S0775Rio Grande (fw11.3-D)fw11.3-D Septum and Placenta, 25 Days Post Anthesis7.37
S0776Rio Grande (fw11.3-D)fw11.3-D Columella, 25 Days Post Anthesis7.83
S0777Rio Grande (fw11.3-D)fw11.3-D Pericarp, 33 Days Post Anthesis6.49
S0778Rio Grande (fw11.3-D)fw11.3-D Septum and Placenta, 33 Days Post Anthesis5.46
S0779Rio Grande (fw11.3-D)fw11.3-D Columella, 33 Days Post Anthesis5.27
S0780Rio Grande (fw11.3-D)fw11.3-D Pericarp, 4 Days Post Anthesis14.58
S0781Rio Grande (fw11.3-D)fw11.3-D Septum, Placenta and Columella, 4 Days Post Anthesis15.98
S0782Rio Grande (fw11.3-D)fw11.3-D Pericarp, 7 Days Post Anthesis12.84
S0783Rio Grande (fw11.3-D)fw11.3-D Septum and Placenta, 7 Days Post Anthesis14.4
S0784Rio Grande (fw11.3-D)fw11.3-D Columella, 7 Days Post Anthesis13.78
S0785Rio Grande (fw11.3-D)fw11.3-D Pericarp, Turning3.92
S0786Rio Grande (fw11.3-D)fw11.3-D Septum and Placenta, Turning4.81
S0787Rio Grande (fw11.3-D)fw11.3-D Columella, Turning5.57
S0788Rio Grande (fw11.3-WT)fw11.3-WT Pericarp, 10 Days Post Anthesis11.57
S0789Rio Grande (fw11.3-WT)fw11.3-WT Septum and Placenta, 10 Days Post Anthesis12.33
S0790Rio Grande (fw11.3-WT)fw11.3-WT Columella, 10 Days Post Anthesis12.63
S0791Rio Grande (fw11.3-WT)fw11.3-WT Pericarp, 15 Days Post Anthesis10.38
S0792Rio Grande (fw11.3-WT)fw11.3-WT Septum and Placenta, 15 Days Post Anthesis11.56
S0793Rio Grande (fw11.3-WT)fw11.3-WT Columella, 15 Days Post Anthesis11
S0794Rio Grande (fw11.3-WT)fw11.3-WT Pericarp, 25 Days Post Anthesis8.49
S0795Rio Grande (fw11.3-WT)fw11.3-WT Septum and Placenta, 25 Days Post Anthesis8.54
S0796Rio Grande (fw11.3-WT)fw11.3-WT Columella, 25 Days Post Anthesis8.67
S0797Rio Grande (fw11.3-WT)fw11.3-WT Pericarp, 33 Days Post Anthesis6
S0798Rio Grande (fw11.3-WT)fw11.3-WT Septum and Placenta, 33 Days Post Anthesis4.22
S0799Rio Grande (fw11.3-WT)fw11.3-WT Columella, 33 Days Post Anthesis7.12
S0800Rio Grande (fw11.3-WT)fw11.3-WT Pericarp, 4 Days Post Anthesis15.35
S0801Rio Grande (fw11.3-WT)fw11.3-WT Septum, Placenta and Columella, 4 Days Post Anthesis16
S0802Rio Grande (fw11.3-WT)fw11.3-WT Pericarp, 7 Days Post Anthesis13.48
S0803Rio Grande (fw11.3-WT)fw11.3-WT Septum and Placenta, 7 Days Post Anthesis14.7
S0804Rio Grande (fw11.3-WT)fw11.3-WT Columella, 7 Days Post Anthesis14.23
S0805Rio Grande (fw11.3-WT)fw11.3-WT Pericarp, Turning5.47
S0806Rio Grande (fw11.3-WT)fw11.3-WT Septum and Placenta, Turning5.36
S0807Rio Grande (fw11.3-WT)fw11.3-WT Columella, Turning5.08

Experiment: Transcriptome profiling of three fruit tissues from the sun NILs in cultivated background
sample IDgenotype descriptionRPM
S0808Sun1642 (sun-WT)SA3 Pericarp and exocarp, 4 Days Post Anthesis9.96
S0809Sun1642 (sun-WT)SA3 Septum and seeds, 4 Days Post Anthesis10.6
S0810Sun1642 (sun-WT)SA3 Pericarp, 7 Days Post Anthesis11.84
S0811Sun1642 (sun-WT)SA3 Septum, 7 Days Post Anthesis11.39
S0812Sun1642 (sun-WT)SA3 Seeds, 7 Days Post Anthesis9.9
S0813Sun1642 (sun-WT)SA3 Pericarp, 10 Days Post Anthesis7.9
S0814Sun1642 (sun-WT)SA3 Septum, 10 Days Post Anthesis8.51
S0815Sun1642 (sun-WT)SA3 Seeds, 10 Days Post Anthesis7.08
S0816Sun1642 (sun-D)SA4 Pericarp and exocarp, 4 Days Post Anthesis13.82
S0817Sun1642 (sun-D)SA4 Septum and seeds, 4 Days Post Anthesis10.4
S0818Sun1642 (sun-D)SA4 Pericarp, 7 Days Post Anthesis9.94
S0819Sun1642 (sun-D)SA4 Septum, 7 Days Post Anthesis12.11
S0820Sun1642 (sun-D)SA4 Seeds, 7 Days Post Anthesis10.2
S0821Sun1642 (sun-D)SA4 Pericarp, 10 Days Post Anthesis8.36
S0822Sun1642 (sun-D)SA4 Septum, 10 Days Post Anthesis8.81
S0823Sun1642 (sun-D)SA4 Seeds, 10 Days Post Anthesis8.73

Experiment: Transcriptome profiling of ripe fruits of S. lycopersicoides ILs
sample IDgenotype descriptionRPM
S0824VF36fruit, red ripe, VF366.45
S0825LA3882fruit, red ripe, S. lycopersicoides IL LA38824.66
S0826LA3886fruit, red ripe, S. lycopersicoides IL LA38865.1
S0827LA3892fruit, red ripe, S. lycopersicoides IL LA38926.11
S0828LA4230fruit, red ripe, S. lycopersicoides IL LA42304.78
S0829LA4231fruit, red ripe, S. lycopersicoides IL LA42313.89
S0830LA4232fruit, red ripe, S. lycopersicoides IL LA42326.66
S0831LA4233fruit, red ripe, S. lycopersicoides IL LA42335.47
S0832LA4234Afruit, red ripe, S. lycopersicoides IL LA4234A5.36
S0833LA4234Bfruit, red ripe, S. lycopersicoides IL LA4234B4.48
S0834LA4235fruit, red ripe, S. lycopersicoides IL LA42354.92
S0835LA4236Afruit, red ripe, S. lycopersicoides IL LA4236A6.38
S0836LA4237fruit, red ripe, S. lycopersicoides IL LA42377.13
S0837LA4238fruit, red ripe, S. lycopersicoides IL LA42384.91
S0838LA4239fruit, red ripe, S. lycopersicoides IL LA42395.86
S0839LA4241Afruit, red ripe, S. lycopersicoides IL LA4241A5.59
S0840LA4241Bfruit, red ripe, S. lycopersicoides IL LA4241B6.25
S0841LA4242Afruit, red ripe, S. lycopersicoides IL LA4242A5.79
S0842LA4242Bfruit, red ripe, S. lycopersicoides IL LA4242B6.29
S0843LA4242Cfruit, red ripe, S. lycopersicoides IL LA4242C6.49
S0844LA4243fruit, red ripe, S. lycopersicoides IL LA42436.24
S0845LA4244fruit, red ripe, S. lycopersicoides IL LA42446.61
S0846LA4245fruit, red ripe, S. lycopersicoides IL LA42455.94
S0847LA4247fruit, red ripe, S. lycopersicoides IL LA42475.18
S0848LA4248fruit, red ripe, S. lycopersicoides IL LA42485.26
S0849LA4249Afruit, red ripe, S. lycopersicoides IL LA4249A5.26
S0850LA4249Bfruit, red ripe, S. lycopersicoides IL LA4249B4.41
S0851LA4250Afruit, red ripe, S. lycopersicoides IL LA4250A6.92
S0852LA4250Bfruit, red ripe, S. lycopersicoides IL LA4250B6.01
S0853LA4250Cfruit, red ripe, S. lycopersicoides IL LA4250C7.16
S0854LA4251fruit, red ripe, S. lycopersicoides IL LA42514.43
S0855LA4252Afruit, red ripe, S. lycopersicoides IL LA4252A5.88
S0856LA4252Bfruit, red ripe, S. lycopersicoides IL LA4252B7.52
S0857LA4252Cfruit, red ripe, S. lycopersicoides IL LA4252C4.95
S0858LA4252Efruit, red ripe, S. lycopersicoides IL LA4252E5.54
S0859LA4252Ffruit, red ripe, S. lycopersicoides IL LA4252F5.43
S0860LA4253fruit, red ripe, S. lycopersicoides IL LA42534.91
S0861LA4254fruit, red ripe, S. lycopersicoides IL LA42545.91
S0862LA4255fruit, red ripe, S. lycopersicoides IL LA42555.22
S0863LA4256fruit, red ripe, S. lycopersicoides IL LA42565.27
S0864LA4257fruit, red ripe, S. lycopersicoides IL LA42575.66
S0865LA4258fruit, red ripe, S. lycopersicoides IL LA42585.64
S0866LA4260fruit, red ripe, S. lycopersicoides IL LA42604.37
S0867LA4262Afruit, red ripe, S. lycopersicoides IL LA4262A5.25
S0868LA4262Bfruit, red ripe, S. lycopersicoides IL LA4262B4.53
S0869LA4263Afruit, red ripe, S. lycopersicoides IL LA4263A6.37
S0870LA4263Bfruit, red ripe, S. lycopersicoides IL LA4263B6.24
S0871LA4263Cfruit, red ripe, S. lycopersicoides IL LA4263C5.84
S0872LA4263Dfruit, red ripe, S. lycopersicoides IL LA4263D4.48
S0873LA4264Afruit, red ripe, S. lycopersicoides IL LA4264A5.62
S0874LA4264Bfruit, red ripe, S. lycopersicoides IL LA4264B5.63
S0875LA4266Afruit, red ripe, S. lycopersicoides IL LA4266A5.51
S0876LA4266Bfruit, red ripe, S. lycopersicoides IL LA4266B5.11
S0877LA4268fruit, red ripe, S. lycopersicoides IL LA42685.29
S0878LA4269fruit, red ripe, S. lycopersicoides IL LA42694.37
S0879LA4270Afruit, red ripe, S. lycopersicoides IL LA4270A5.48
S0880LA4270Bfruit, red ripe, S. lycopersicoides IL LA4270B4.52
S0881LA4272fruit, red ripe, S. lycopersicoides IL LA42724.45
S0882LA4273fruit, red ripe, S. lycopersicoides IL LA42735.53
S0883LA4274fruit, red ripe, S. lycopersicoides IL LA42746.17
S0884LA4275fruit, red ripe, S. lycopersicoides IL LA42754.61
S0885LA4276Afruit, red ripe, S. lycopersicoides IL LA4276A5.09
S0886LA4276Bfruit, red ripe, S. lycopersicoides IL LA4276B5.35
S0887LA4276Cfruit, red ripe, S. lycopersicoides IL LA4276C5.72
S0888LA4276Dfruit, red ripe, S. lycopersicoides IL LA4276D3.35
S0889LA4277fruit, red ripe, S. lycopersicoides IL LA42775.92
S0890LA4277Bfruit, red ripe, S. lycopersicoides IL LA4277B3.15
S0891LA4277Cfruit, red ripe, S. lycopersicoides IL LA4277C3.73
S0892LA4278Afruit, red ripe, S. lycopersicoides IL LA4278A5.68
S0893LA4278Bfruit, red ripe, S. lycopersicoides IL LA4278B5.43
S0894LA4279fruit, red ripe, S. lycopersicoides IL LA42795.79
S0895LA4280fruit, red ripe, S. lycopersicoides IL LA42806.06
S0896LA4281Afruit, red ripe, S. lycopersicoides IL LA4281A6
S0897LA4281Bfruit, red ripe, S. lycopersicoides IL LA4281B6.15
S0898LA4281Cfruit, red ripe, S. lycopersicoides IL LA4281C5.8
S0899LA4281Dfruit, red ripe, S. lycopersicoides IL LA4281D6.34
S0900LA4281Efruit, red ripe, S. lycopersicoides IL LA4281E4.96
S0901LA4282Afruit, red ripe, S. lycopersicoides IL LA4282A4.79
S0902LA4282Bfruit, red ripe, S. lycopersicoides IL LA4282B5.5
S0903LA4282Cfruit, red ripe, S. lycopersicoides IL LA4282C7
S0904LA4284fruit, red ripe, S. lycopersicoides IL LA42844.81
S0905LA4294Afruit, red ripe, S. lycopersicoides IL LA4294A6.14
S0906LA4294Bfruit, red ripe, S. lycopersicoides IL LA4294B4.01
S0907LA4295fruit, red ripe, S. lycopersicoides IL LA42953.73
S0908LA4296fruit, red ripe, S. lycopersicoides IL LA42965.19
S0909LA4297fruit, red ripe, S. lycopersicoides IL LA42975.14
S0910LA4298fruit, red ripe, S. lycopersicoides IL LA42984.02
S0911LA4299fruit, red ripe, S. lycopersicoides IL LA42995.44
S0912LA4300Afruit, red ripe, S. lycopersicoides IL LA4300A5.26
S0913LA4300Bfruit, red ripe, S. lycopersicoides IL LA4300B4.27
S0914LA4301Afruit, red ripe, S. lycopersicoides IL LA4301A4.22
S0915LA4303fruit, red ripe, S. lycopersicoides IL LA43033.93
S0916LA4305fruit, red ripe, S. lycopersicoides IL LA43056.89
S0917LA4306Afruit, red ripe, S. lycopersicoides IL LA4306A5.59
S0918LA4306Bfruit, red ripe, S. lycopersicoides IL LA4306B3.2
S0919LA4307fruit, red ripe, S. lycopersicoides IL LA43074.84
S0920LA4308fruit, red ripe, S. lycopersicoides IL LA43086.92
S0921LA4308Afruit, red ripe, S. lycopersicoides IL LA4308A5.87
S0922LA4309fruit, red ripe, S. lycopersicoides IL LA43094.77
S0923LA4310fruit, red ripe, S. lycopersicoides IL LA43106.74
S0924LA4311fruit, red ripe, S. lycopersicoides IL LA43117.67
S0925LA4312Afruit, red ripe, S. lycopersicoides IL LA4312A4.32
S0926LA4312Bfruit, red ripe, S. lycopersicoides IL LA4312B5.88
S0927LA4313Afruit, red ripe, S. lycopersicoides IL LA4313A3.62
S0928LA4313Bfruit, red ripe, S. lycopersicoides IL LA4313B4.77

Experiment: Transcriptome profiling of ripe fruits of S. pimpinellifolium RILs
sample IDgenotype descriptionRPM
S0953LA2093fruit, red ripe, S. pimpinellifolium LA20933.87
S0954NCEBR1fruit, red ripe, S. lycopersicum NCEBR14.52
S0955RIL-1fruit, red ripe, S. pimpinellifolium RIL-16.04
S0956RIL-3fruit, red ripe, S. pimpinellifolium RIL-34.45
S0957RIL-4fruit, red ripe, S. pimpinellifolium RIL-46.27
S0958RIL-5fruit, red ripe, S. pimpinellifolium RIL-53.53
S0959RIL-6fruit, red ripe, S. pimpinellifolium RIL-64.94
S0960RIL-7fruit, red ripe, S. pimpinellifolium RIL-73.39
S0961RIL-11fruit, red ripe, S. pimpinellifolium RIL-114.27
S0962RIL-12fruit, red ripe, S. pimpinellifolium RIL-124.03
S0963RIL-13fruit, red ripe, S. pimpinellifolium RIL-134.36
S0964RIL-14fruit, red ripe, S. pimpinellifolium RIL-144.66
S0965RIL-16fruit, red ripe, S. pimpinellifolium RIL-164.46
S0966RIL-18fruit, red ripe, S. pimpinellifolium RIL-185.17
S0967RIL-19fruit, red ripe, S. pimpinellifolium RIL-196.59
S0968RIL-20fruit, red ripe, S. pimpinellifolium RIL-204.41
S0969RIL-21fruit, red ripe, S. pimpinellifolium RIL-212.71
S0970RIL-22fruit, red ripe, S. pimpinellifolium RIL-224.63
S0971RIL-23fruit, red ripe, S. pimpinellifolium RIL-232.7
S0972RIL-24fruit, red ripe, S. pimpinellifolium RIL-244.97
S0973RIL-25fruit, red ripe, S. pimpinellifolium RIL-252.54
S0974RIL-26fruit, red ripe, S. pimpinellifolium RIL-265.77
S0975RIL-27fruit, red ripe, S. pimpinellifolium RIL-272.85
S0976RIL-28fruit, red ripe, S. pimpinellifolium RIL-282.49
S0977RIL-30fruit, red ripe, S. pimpinellifolium RIL-306.57
S0978RIL-31fruit, red ripe, S. pimpinellifolium RIL-313.13
S0979RIL-32fruit, red ripe, S. pimpinellifolium RIL-323.26
S0980RIL-33fruit, red ripe, S. pimpinellifolium RIL-333.22
S0981RIL-34fruit, red ripe, S. pimpinellifolium RIL-342.48
S0982RIL-35fruit, red ripe, S. pimpinellifolium RIL-357.28
S0983RIL-37fruit, red ripe, S. pimpinellifolium RIL-376.46
S0984RIL-38fruit, red ripe, S. pimpinellifolium RIL-384.57
S0985RIL-39fruit, red ripe, S. pimpinellifolium RIL-394.59
S0986RIL-41fruit, red ripe, S. pimpinellifolium RIL-413.45
S0987RIL-43fruit, red ripe, S. pimpinellifolium RIL-432.78
S0988RIL-45fruit, red ripe, S. pimpinellifolium RIL-453.73
S0989RIL-47fruit, red ripe, S. pimpinellifolium RIL-472.89
S0990RIL-48fruit, red ripe, S. pimpinellifolium RIL-483.71
S0991RIL-49fruit, red ripe, S. pimpinellifolium RIL-493.64
S0992RIL-50fruit, red ripe, S. pimpinellifolium RIL-503.93
S0993RIL-52fruit, red ripe, S. pimpinellifolium RIL-524.86
S0994RIL-53fruit, red ripe, S. pimpinellifolium RIL-534.84
S0995RIL-54fruit, red ripe, S. pimpinellifolium RIL-541.96
S0996RIL-55fruit, red ripe, S. pimpinellifolium RIL-554.02
S0997RIL-56fruit, red ripe, S. pimpinellifolium RIL-564.83
S0998RIL-57fruit, red ripe, S. pimpinellifolium RIL-573.48
S0999RIL-58fruit, red ripe, S. pimpinellifolium RIL-584.17
S1000RIL-62fruit, red ripe, S. pimpinellifolium RIL-625.38
S1001RIL-63fruit, red ripe, S. pimpinellifolium RIL-633.11
S1002RIL-65fruit, red ripe, S. pimpinellifolium RIL-653.18
S1003RIL-66fruit, red ripe, S. pimpinellifolium RIL-663.73
S1004RIL-67fruit, red ripe, S. pimpinellifolium RIL-673.06
S1005RIL-68fruit, red ripe, S. pimpinellifolium RIL-683.78
S1006RIL-69fruit, red ripe, S. pimpinellifolium RIL-695.2
S1007RIL-71fruit, red ripe, S. pimpinellifolium RIL-714.62
S1008RIL-72fruit, red ripe, S. pimpinellifolium RIL-723.62
S1009RIL-73fruit, red ripe, S. pimpinellifolium RIL-733.99
S1010RIL-75fruit, red ripe, S. pimpinellifolium RIL-752.51
S1011RIL-76fruit, red ripe, S. pimpinellifolium RIL-764.83
S1012RIL-77fruit, red ripe, S. pimpinellifolium RIL-775.93
S1013RIL-78fruit, red ripe, S. pimpinellifolium RIL-784.77
S1014RIL-79fruit, red ripe, S. pimpinellifolium RIL-793.03
S1015RIL-80fruit, red ripe, S. pimpinellifolium RIL-802.62
S1016RIL-81fruit, red ripe, S. pimpinellifolium RIL-815.56
S1017RIL-84fruit, red ripe, S. pimpinellifolium RIL-843.07
S1018RIL-85fruit, red ripe, S. pimpinellifolium RIL-854.71
S1019RIL-88fruit, red ripe, S. pimpinellifolium RIL-883.53
S1020RIL-90fruit, red ripe, S. pimpinellifolium RIL-903.74
S1021RIL-91fruit, red ripe, S. pimpinellifolium RIL-913.35
S1022RIL-95fruit, red ripe, S. pimpinellifolium RIL-953.34
S1023RIL-96fruit, red ripe, S. pimpinellifolium RIL-964.51
S1024RIL-97fruit, red ripe, S. pimpinellifolium RIL-973.83
S1025RIL-98fruit, red ripe, S. pimpinellifolium RIL-985.41
S1026RIL-99fruit, red ripe, S. pimpinellifolium RIL-995.87
S1027RIL-100fruit, red ripe, S. pimpinellifolium RIL-1005.48
S1028RIL-101fruit, red ripe, S. pimpinellifolium RIL-1014.06
S1029RIL-102fruit, red ripe, S. pimpinellifolium RIL-1024.54
S1030RIL-103fruit, red ripe, S. pimpinellifolium RIL-1033.3
S1031RIL-105fruit, red ripe, S. pimpinellifolium RIL-1051.97
S1032RIL-107fruit, red ripe, S. pimpinellifolium RIL-1073.83
S1033RIL-108fruit, red ripe, S. pimpinellifolium RIL-1082.77
S1034RIL-109fruit, red ripe, S. pimpinellifolium RIL-1093.98
S1035RIL-111fruit, red ripe, S. pimpinellifolium RIL-1113.53
S1036RIL-112fruit, red ripe, S. pimpinellifolium RIL-1122.19
S1037RIL-113fruit, red ripe, S. pimpinellifolium RIL-1133.32
S1038RIL-114fruit, red ripe, S. pimpinellifolium RIL-1142.9
S1039RIL-115fruit, red ripe, S. pimpinellifolium RIL-1154.41
S1040RIL-116fruit, red ripe, S. pimpinellifolium RIL-1164.49
S1041RIL-117fruit, red ripe, S. pimpinellifolium RIL-1174.63
S1042RIL-118fruit, red ripe, S. pimpinellifolium RIL-1182.61
S1043RIL-120fruit, red ripe, S. pimpinellifolium RIL-1205.07
S1044RIL-121fruit, red ripe, S. pimpinellifolium RIL-1214.14
S1045RIL-122fruit, red ripe, S. pimpinellifolium RIL-1223.47
S1046RIL-123fruit, red ripe, S. pimpinellifolium RIL-1234.87
S1047RIL-124fruit, red ripe, S. pimpinellifolium RIL-1245.2
S1048RIL-125fruit, red ripe, S. pimpinellifolium RIL-1252.81
S1049RIL-126fruit, red ripe, S. pimpinellifolium RIL-1263.98
S1050RIL-128fruit, red ripe, S. pimpinellifolium RIL-1283.28
S1051RIL-129fruit, red ripe, S. pimpinellifolium RIL-1294.74
S1052RIL-130fruit, red ripe, S. pimpinellifolium RIL-1302.75
S1053RIL-131fruit, red ripe, S. pimpinellifolium RIL-1314.74
S1054RIL-132fruit, red ripe, S. pimpinellifolium RIL-1325.8
S1055RIL-133fruit, red ripe, S. pimpinellifolium RIL-1335.24
S1056RIL-134fruit, red ripe, S. pimpinellifolium RIL-1345.89
S1057RIL-135fruit, red ripe, S. pimpinellifolium RIL-1354.07
S1058RIL-137fruit, red ripe, S. pimpinellifolium RIL-1372.75
S1059RIL-139fruit, red ripe, S. pimpinellifolium RIL-1391.88
S1060RIL-140fruit, red ripe, S. pimpinellifolium RIL-1403.12
S1061RIL-142fruit, red ripe, S. pimpinellifolium RIL-1425.48
S1062RIL-143fruit, red ripe, S. pimpinellifolium RIL-1435.78
S1063RIL-144fruit, red ripe, S. pimpinellifolium RIL-1443.58
S1064RIL-145fruit, red ripe, S. pimpinellifolium RIL-1455.36
S1065RIL-146fruit, red ripe, S. pimpinellifolium RIL-1464.48
S1066RIL-147fruit, red ripe, S. pimpinellifolium RIL-1475.13
S1067RIL-148fruit, red ripe, S. pimpinellifolium RIL-1482.49
S1068RIL-149fruit, red ripe, S. pimpinellifolium RIL-1493.68
S1069RIL-150fruit, red ripe, S. pimpinellifolium RIL-1504.38
S1070RIL-151fruit, red ripe, S. pimpinellifolium RIL-1512.67
S1071RIL-152fruit, red ripe, S. pimpinellifolium RIL-1524.71
S1072RIL-153fruit, red ripe, S. pimpinellifolium RIL-1533.58
S1073RIL-154fruit, red ripe, S. pimpinellifolium RIL-1543.87
S1074RIL-155fruit, red ripe, S. pimpinellifolium RIL-1553.24
S1075RIL-156fruit, red ripe, S. pimpinellifolium RIL-1563.78
S1076RIL-159fruit, red ripe, S. pimpinellifolium RIL-1593.89
S1077RIL-160fruit, red ripe, S. pimpinellifolium RIL-1604.19
S1078RIL-161fruit, red ripe, S. pimpinellifolium RIL-1613.76
S1079RIL-162fruit, red ripe, S. pimpinellifolium RIL-1622.07
S1080RIL-164fruit, red ripe, S. pimpinellifolium RIL-1642.49
S1081RIL-165fruit, red ripe, S. pimpinellifolium RIL-1653
S1082RIL-167fruit, red ripe, S. pimpinellifolium RIL-1672.21
S1083RIL-168fruit, red ripe, S. pimpinellifolium RIL-1682.85
S1084RIL-169fruit, red ripe, S. pimpinellifolium RIL-1696.71
S1085RIL-171fruit, red ripe, S. pimpinellifolium RIL-1716.57
S1086RIL-172fruit, red ripe, S. pimpinellifolium RIL-1724.06

Experiment: Transcriptome profiling of fruit of cultivated and wild tomatoes
sample IDgenotype descriptionRPM
S1107LA0816 (VF-145)LA0816 immature green fruit5.84
S1108LA0816 (VF-145)LA0816 mature green fruit4.06
S1109LA0816 (VF-145)LA0816 breaker fruit5.01
S1110LA0816 (VF-145)LA0816 ripe fruit7.19
S1111LA1563LA1563 immature green fruit4.23
S1112LA1563LA1563 mature green fruit3.69
S1113LA1563LA1563 breaker fruit4.27
S1114LA1563LA1563 ripe fruit7.33
S1115BD-MPBD-MP immature green fruit6.48
S1116BD-MPBD-MP mature green fruit4.83
S1117BD-MPBD-MP breaker fruit3.73
S1118BD-MPBD-MP ripe fruit6.64
S1119BD-MTBD-MT immature green fruit3.81
S1120BD-MTBD-MT mature green fruit4.09
S1121BD-MTBD-MT breaker fruit4.68
S1122BD-MTBD-MT ripe fruit6.53
S1123LA1306LA1306 immature green fruit6.77
S1124LA1306LA1306 mature green fruit4.1
S1125LA1306LA1306 breaker fruit4.49
S1126LA1306LA1306 ripe fruit6.09
S1127LA1412LA1412 immature green fruit3.92
S1128LA1412LA1412 mature green fruit3.98
S1129LA1412LA1412 breaker fruit3.36
S1130LA1412LA1412 ripe fruit3.08
S1131LA1586LA1586 immature green fruit4.53
S1132LA1586LA1586 mature green fruit3.64
S1133LA1586LA1586 breaker fruit3.61
S1134LA1586LA1586 ripe fruit3.99
S1135LA1589LA1589 immature green fruit5.62
S1136LA1589LA1589 mature green fruit4.91
S1137LA1589LA1589 breaker fruit3.27
S1138LA1589LA1589 ripe fruit5.62
S1139LA1028LA1028 immature green fruit4.56
S1141LA1028LA1028 breaker fruit1.96
S1142LA1028LA1028 ripe fruit1.26
S1143LA1318LA1318 immature green fruit4.65
S1144LA1318LA1318 mature green fruit3.74
S1145LA1318LA1318 breaker fruit2.14
S1146LA1318LA1318 ripe fruit3.7
S1147BD-732BD-732 immature green fruit4.26
S1148BD-732BD-732 mature green fruit5.1
S1149BD-732BD-732 breaker fruit2.06
S1150BD-732BD-732 ripe fruit3.74
S1151LA0407LA0407 immature green fruit4.83
S1152LA0407LA0407 mature green fruit2.37
S1153LA0407LA0407 breaker fruit4.69
S1154LA0407LA0407 ripe fruit4.42
S1155LA1777LA1777 immature green fruit4.61
S1156LA1777LA1777 mature green fruit1.84
S1157LA1777LA1777 breaker fruit2.36
S1158LA1777LA1777 ripe fruit2.72
S1159LA0716LA0716 immature green fruit5.71
S1160LA0716LA0716 mature green fruit5.29
S1161LA0716LA0716 breaker fruit2.12
S1162LA0716LA0716 ripe fruit3.52
S1163PI126431PI126431 immature green fruit3.96
S1164PI126431PI126431 mature green fruit3.25
S1165PI126431PI126431 breaker fruit3.1
S1166PI126431PI126431 ripe fruit2.96
S1167PI126926PI126926 immature green fruit4.27
S1168PI126926PI126926 mature green fruit1.36
S1169PI126926PI126926 breaker fruit2.95
S1170PI126926PI126926 ripe fruit2.93
S1171LA1584LA1584 ripe fruit3.6
S1172LA2173LA2173 ripe fruit2.22
S1173LA1301LA1301 ripe fruit3.27
S1174LA1335LA1335 ripe fruit3.56
S1175LA1371LA1371 ripe fruit3.08
S1176LA1521LA1521 ripe fruit4.21
S1177LA1659LA1659 ripe fruit4.23
S1178LA0722LA0722 ripe fruit5.83
S1179LA1547LA1547 ripe fruit2.78
S1180LA3123LA3123 ripe fruit2.95
S1181LA2096LA2096 ripe fruit4.25
S1182LA1246LA1246 ripe fruit3.91
S1183LA1259LA1259 ripe fruit2.81
S1184LA2093LA2093 ripe fruit3.19
S1185LA0418LA0418 ripe fruit3.74
S1186LA2850LA2850 ripe fruit3.48
S1187LA1043LA1043 ripe fruit4.52
S1188LA0438LA0438 ripe fruit5.01
S1189LA0532LA0532 ripe fruit5.87
S1190LA1044LA1044 ripe fruit4.52
S1191LA1452LA1452 ripe fruit5.43
S1192LA0528LA0528 ripe fruit4.23
S1193LA0530LA0530 ripe fruit5.47
S1194LA0480ALA0480A ripe fruit3.73
S1195LA0521LA0521 ripe fruit3.16
S1196LA0422LA0422 ripe fruit3
S1197LA0529LA0529 ripe fruit3.41
S1198LA1039LA1039 ripe fruit3.35
S1199LA1042LA1042 ripe fruit4.19
S1200LA1407LA1407 ripe fruit4.06
S1201LA1035LA1035 ripe fruit3.19