Solyc08g081270 expression

Experiment: Transcriptome profiling of pennellii ILs
sample IDgenotype descriptionRPM
S0001M82fruit, red ripe, M8238.05
S00021-1fruit, red ripe, S. pennellii IL1-147.35
S00031-1-2fruit, red ripe, S. pennellii IL1-1-254.9
S00041-1-3fruit, red ripe, S. pennellii IL1-1-352.31
S00051-2fruit, red ripe, S. pennellii IL1-241.71
S00061-3fruit, red ripe, S. pennellii IL1-344.94
S00071-4fruit, red ripe, S. pennellii IL1-459.77
S00081-4-18fruit, red ripe, S. pennellii IL1-4-1852.65
S00092-1fruit, red ripe, S. pennellii IL2-158.63
S00102-1-1fruit, red ripe, S. pennellii IL2-1-143.59
S00112-2fruit, red ripe, S. pennellii IL2-249.4
S00122-3fruit, red ripe, S. pennellii IL2-339.63
S00132-4fruit, red ripe, S. pennellii IL2-460.66
S00142-5fruit, red ripe, S. pennellii IL2-544.61
S00152-6fruit, red ripe, S. pennellii IL2-626.73
S00162-6-5fruit, red ripe, S. pennellii IL2-6-563.46
S00173-1fruit, red ripe, S. pennellii IL3-143.95
S00183-2fruit, red ripe, S. pennellii IL3-250.8
S00203-4fruit, red ripe, S. pennellii IL3-449.28
S00213-5fruit, red ripe, S. pennellii IL3-548.83
S00224-1fruit, red ripe, S. pennellii IL4-146.07
S00234-1-1fruit, red ripe, S. pennellii IL4-1-154.5
S00244-2fruit, red ripe, S. pennellii IL4-238.69
S00254-3fruit, red ripe, S. pennellii IL4-338.27
S00264-3-2fruit, red ripe, S. pennellii IL4-3-237.78
S00274-4fruit, red ripe, S. pennellii IL4-450.07
S00285-1fruit, red ripe, S. pennellii IL5-149.4
S00295-2fruit, red ripe, S. pennellii IL5-256.98
S00305-3fruit, red ripe, S. pennellii IL5-345.22
S00315-4fruit, red ripe, S. pennellii IL5-459.15
S00325-5fruit, red ripe, S. pennellii IL5-556.98
S00346-2fruit, red ripe, S. pennellii IL6-239.02
S00356-2-2fruit, red ripe, S. pennellii IL6-2-269.42
S00366-3fruit, red ripe, S. pennellii IL6-342.62
S00376-4fruit, red ripe, S. pennellii IL6-441.2
S00387-1fruit, red ripe, S. pennellii IL7-136.39
S00397-2fruit, red ripe, S. pennellii IL7-249.98
S00407-3fruit, red ripe, S. pennellii IL7-340.57
S00417-4fruit, red ripe, S. pennellii IL7-451.73
S00427-4-1fruit, red ripe, S. pennellii IL7-4-142.08
S00437-5fruit, red ripe, S. pennellii IL7-543.53
S00447-5-5fruit, red ripe, S. pennellii IL7-5-551.76
S00458-1fruit, red ripe, S. pennellii IL8-157.18
S00468-1-1fruit, red ripe, S. pennellii IL8-1-140.78
S00478-1-5fruit, red ripe, S. pennellii IL8-1-545.24
S00488-2fruit, red ripe, S. pennellii IL8-252.48
S00498-2-1fruit, red ripe, S. pennellii IL8-2-169.02
S00508-3fruit, red ripe, S. pennellii IL8-373.77
S00518-3-1fruit, red ripe, S. pennellii IL8-3-156.23
S00529-1fruit, red ripe, S. pennellii IL9-140.93
S00539-1-2fruit, red ripe, S. pennellii IL9-1-233.39
S00549-1-3fruit, red ripe, S. pennellii IL9-1-348.87
S00559-2fruit, red ripe, S. pennellii IL9-243.23
S00569-2-5fruit, red ripe, S. pennellii IL9-2-538.93
S00579-2-6fruit, red ripe, S. pennellii IL9-2-655.25
S00589-3fruit, red ripe, S. pennellii IL9-358.11
S00599-3-1fruit, red ripe, S. pennellii IL9-3-153.09
S00609-3-2fruit, red ripe, S. pennellii IL9-3-247.26
S006110-1fruit, red ripe, S. pennellii IL10-162.93
S006210-1-1fruit, red ripe, S. pennellii IL10-1-150.36
S006310-2fruit, red ripe, S. pennellii IL10-253.81
S006410-2-2fruit, red ripe, S. pennellii IL10-2-253.32
S006510-3fruit, red ripe, S. pennellii IL10-348.66
S006611-1fruit, red ripe, S. pennellii IL11-160.5
S006711-2fruit, red ripe, S. pennellii IL11-246.91
S006811-3fruit, red ripe, S. pennellii IL11-338.36
S006911-4fruit, red ripe, S. pennellii IL11-439
S007011-4-1fruit, red ripe, S. pennellii IL11-4-148.32
S007112-1fruit, red ripe, S. pennellii IL12-153.63
S007212-1-1fruit, red ripe, S. pennellii IL12-1-157.75
S007312-2fruit, red ripe, S. pennellii IL12-229.98
S007412-3fruit, red ripe, S. pennellii IL12-352.74
S007512-3-1fruit, red ripe, S. pennellii IL12-3-154.55
S007612-4fruit, red ripe, S. pennellii IL12-448.5
S007712-4-1fruit, red ripe, S. pennellii IL12-4-161.71

Experiment: Transcriptome analysis of various tissues in tomato cultivar Heinz and the wild relative Solanum pimpinellifolium
sample IDgenotype descriptionRPM
S0584HeinzHeinz unopened flower buds30.12
S0585HeinzHeinz fully opened flowers30.77
S0586HeinzHeinz 1 cm fruits29.25
S0587HeinzHeinz 2 cm fruits24.38
S0588HeinzHeinz 3 cm fruits23.54
S0589HeinzHeinz mature green fruits21.35
S0590HeinzHeinz breaker fruits37.62
S0591HeinzHeinz breaker+10 fruits29.79
S0592HeinzHeinz roots37.21
S0593HeinzHeinz leaves24.36
S0594pimpinellifolium immature green fruits33.65
S0595pimpinellifolium breaker fruits34.07
S0596pimpinellifolium breaker+5 fruits24.95
S0597pimpinellifolium leaves7.88

Experiment: Transcriptome profiling of young flower buds of WT, sun, ovate and fs8.1 NILs in the LA1589 background
sample IDgenotype descriptionRPM
S0929LA1589LA1589 young flower buds at 4 days post-initiation of floral meristem69.85
S0930LA1589LA1589 young flower buds at 6 days post-initiation of floral meristem68.83
S0931LA1589LA1589 young flower buds at 8 days post-initiation of floral meristem72.63
S0932LA1589LA1589 young flower buds at 10 days post-initiation of floral meristem38.31
S0933LA1589LA1589 young flower buds at 13 days post-initiation of floral meristem37.77
S0934LA1589LA1589 young flower buds at 16 days post-initiation of floral meristem40.64
S0935sun NIL in the LA1589 backgroundsun young flower buds at 4 days post-initiation of floral meristem72.1
S0936sun NIL in the LA1589 backgroundsun young flower buds at 6 days post-initiation of floral meristem69.67
S0937sun NIL in the LA1589 backgroundsun young flower buds at 8 days post-initiation of floral meristem74.28
S0938sun NIL in the LA1589 backgroundsun young flower buds at 10 days post-initiation of floral meristem37.21
S0939sun NIL in the LA1589 backgroundsun young flower buds at 13 days post-initiation of floral meristem43.15
S0940sun NIL in the LA1589 backgroundsun young flower buds at 16 days post-initiation of floral meristem36.9
S0941ovate NIL in the LA1589 backgroundovate young flower buds at 4 days post-initiation of floral meristem75.35
S0942ovate NIL in the LA1589 backgroundovate young flower buds at 6 days post-initiation of floral meristem69.78
S0943ovate NIL in the LA1589 backgroundovate young flower buds at 8 days post-initiation of floral meristem78.59
S0944ovate NIL in the LA1589 backgroundovate young flower buds at 10 days post-initiation of floral meristem35.89
S0945ovate NIL in the LA1589 backgroundovate young flower buds at 13 days post-initiation of floral meristem36.89
S0946ovate NIL in the LA1589 backgroundovate young flower buds at 16 days post-initiation of floral meristem39.23
S0947fs8.1 NIL in the LA1589 backgroundfs8.1 young flower buds at 4 days post-initiation of floral meristem72.03
S0948fs8.1 NIL in the LA1589 backgroundfs8.1 young flower buds at 6 days post-initiation of floral meristem64.84
S0949fs8.1 NIL in the LA1589 backgroundfs8.1 young flower buds at 8 days post-initiation of floral meristem78.35
S0950fs8.1 NIL in the LA1589 backgroundfs8.1 young flower buds at 10 days post-initiation of floral meristem39.77
S0951fs8.1 NIL in the LA1589 backgroundfs8.1 young flower buds at 13 days post-initiation of floral meristem45.78
S0952fs8.1 NIL in the LA1589 backgroundfs8.1 young flower buds at 16 days post-initiation of floral meristem49.9

Experiment: Transcriptome analysis of various tissues in wild species S. pimpinellifolium, LA1589
sample IDgenotype descriptionRPM
S0608LA1589anthesis flowers (0DPA)15.44
S0609LA158910 days post anthesis fruit (10 DPA1)24.3
S0610LA158910 days post anthesis fruit 2 (10 DPA2)20.61
S0611LA158920 days post anthesis fruit (20DPA)23.3
S0612LA1589rippening fruit (33DPA)23.27
S0613LA1589cotyledons (COTYL)29.33
S0614LA1589hypocotyl (HYPO)31.86
S0615LA1589vegitative meristems (MERI)31.83
S0616LA1589mature leaves (ML)20.09
S0617LA1589whole root (ROOT)44.95
S0618LA1589young flower buds (YFB)29.47
S0619LA1589young leaves (YL)26.04

Experiment: Transcriptome sequencing of tomato leaves treated with different bacteria and PAMPs
sample IDgenotype descriptionRPM
S0620Rio Grande prf3 (deletion in Prf)mock PAMPs 30 min15.54
S0621Rio Grande prf3 (deletion in Prf)cold shock protein 22 (csp22) 30 min17.54
S0622Rio Grande prf3 (deletion in Prf)flagellin 22 (flg22) 30 min18.04
S0623Rio Grande prf3 (deletion in Prf)flagellin II-28 (flgII-28) 30 min15.35
S0624Rio Grande prf3 (deletion in Prf)Lipopolysaccharides (LPS) 30 min17.41
S0625Rio Grande prf3 (deletion in Prf)Peptidoglycan (PGN) 30 min14.99
S0626Rio Grande prf3 (deletion in Prf)mock PAMPs 6h28.52
S0627Rio Grande prf3 (deletion in Prf)cold shock protein 22 (csp22) 6 h24.28
S0628Rio Grande prf3 (deletion in Prf)flagellin 22 (flg22) 6h26.68
S0629Rio Grande prf3 (deletion in Prf)flagellin II-28 (flgII-28) 6h21.51
S0630Rio Grande prf3 (deletion in Prf)Lipopolysaccharides (LPS) 6 h23.4
S0631Rio Grande prf3 (deletion in Prf)Peptidoglycan (PGN) 6h 26.09
S0632Rio Grande prf3 (deletion in Prf)mock bacteria 30 min15.42
S0633Rio Grande prf3 (deletion in Prf)DC3000 30 min17.77
S0634Rio Grande prf3 (deletion in Prf)DC3000ΔhrcQ-U 30 min15.43
S0635Rio Grande prf3 (deletion in Prf)DC3000ΔhrcQ-UΔfliC 30 min15.65
S0636Rio Grande prf3 (deletion in Prf)DC3000Δ28 30 min15.58
S0637Rio Grande prf3 (deletion in Prf)DC3000ΔAvrPtoΔAvrPtoB 30 min18.31
S0638Rio Grande prf3 (deletion in Prf)Pseudomonas fluorescens 30 min17.74
S0639Rio Grande prf3 (deletion in Prf)Pseudomonas putida 30 min14.63
S0640Rio Grande prf3 (deletion in Prf)Agrobacterium tumefaciens 30 min16.97
S0641Rio Grande prf3 (deletion in Prf)mock bacteria 6 h25.68
S0642Rio Grande prf3 (deletion in Prf)DC3000 6 h24.01
S0643Rio Grande prf3 (deletion in Prf)DC3000ΔhrcQ-U 6 h22.07
S0644Rio Grande prf3 (deletion in Prf)DC3000ΔhrcQ-UΔfliC 6 h27.66
S0645Rio Grande prf3 (deletion in Prf)DC3000Δ28 6 h20.43
S0646Rio Grande prf3 (deletion in Prf)DC3000ΔAvrPtoΔAvrPtoB 6 h20.71
S0647Rio Grande prf3 (deletion in Prf)Pseudomonas fluorescens 6 h22.64
S0648Rio Grande prf3 (deletion in Prf)Pseudomonas putida 6 h20.02
S0649Rio Grande prf3 (deletion in Prf)Agrobacterium tumefaciens 6 h23.38

Experiment: Transcriptome or gene expression of various fruit tissue in FW3.2 NILs
sample IDgenotype descriptionRPM
S0671Yellow Stuffer (cultivated allele of fw3.2)fw3.2(ys) 5 Days Post Anthesis Pericarp20.43
S0672Yellow Stuffer (wild allele of fw3.2)fw3.2(wt) 5 Days Post Anthesis Pericarp22.22
S0673Yellow Stuffer (cultivated allele of fw3.2)fw3.2(ys) 7 Days Post Anthesis Pericarp16.81
S0674Yellow Stuffer (wild allele of fw3.2)fw3.2(wt) 7 Days Post Anthesis Pericarp17.13
S0675Yellow Stuffer (cultivated allele of fw3.2)fw3.2(ys) 10 Days Post Anthesis Pericarp18.71
S0676Yellow Stuffer (wild allele of fw3.2)fw3.2(wt) 10 Days Post Anthesis Pericarp18.8
S0677Yellow Stuffer (cultivated allele of fw3.2)fw3.2(ys) 5 Days Post Anthesis Seed21.35
S0678Yellow Stuffer (wild allele of fw3.2)fw3.2(wt) 5 Days Post Anthesis Seed22.24
S0679Yellow Stuffer (cultivated allele of fw3.2)fw3.2(ys) 7 Days Post Anthesis Seed19.63
S0680Yellow Stuffer (wild allele of fw3.2)fw3.2(wt) 7 Days Post Anthesis Seed17.9
S0681Yellow Stuffer (cultivated allele of fw3.2)fw3.2(ys) 10 Days Post Anthesis Seed23.37
S0682Yellow Stuffer (wild allele of fw3.2)fw3.2(wt) 10 Days Post Anthesis Seed24.05
S0683Yellow Stuffer (cultivated allele of fw3.2)fw3.2(ys) young flower bud77.07
S0684Yellow Stuffer (wild allele of fw3.2)fw3.2(wt) young flower bud79.06

Experiment: Tissue-specific transcriptome profiling of Solanum pimpinellifolium ovaries and fruit using LCM-coupled to RNA-seq
sample IDgenotype descriptionRPM
S0685LA1589LA1589, Ovule 0 dpa (SA1_D0_OV)51.76
S0686sunsun, Ovule 0 dpa (SA2_D0_OV)57.3
S0687LA1589LA1589, Placenta 0 dpa (SA1_D0_PL)45.8
S0688sunsun, Placenta 0 dpa (SA2_D0_PL)50.33
S0689LA1589LA1589, Septum 0 dpa (SA1_D0_SE)43.23
S0690sunsun, Septum 0 dpa (SA2_D0_SE)41.82
S0691LA1589LA1589, Pericarp 0 dpa (SA1_D0_PE)25.39
S0692sunsun, Pericarp 0 dpa (SA2_D0_PE)33.58
S0693LA1589LA1589, Embryo 4 dpa Fruit (SA1_D4_EM)25.27
S0694sunsun, Embryo 4 dpa Fruit (SA2_D4_EM)26.22
S0695LA1589LA1589, Endosperm 4 dpa Fruit (SA1_D4_ENDO)31.42
S0696sunsun, Endosperm 4 dpa Fruit (SA2_D4_ENDO)29.35
S0697LA1589LA1589, Seed Coat 4 dpa Fruit (SA1_D4_SC)30.32
S0698sunsun, Seed Coat 4 dpa Fruit (SA2_D4_SC)28.72
S0699LA1589LA1589, Funiculus 4 dpa Fruit (SA1_D4_FU)34.07
S0700sunsun, Funiculus 4 dpa Fruit (SA2_D4_FU)26.3
S0701LA1589LA1589, Placenta 4 dpa Fruit (SA1_D4_PL)24.99
S0702sunsun, Placenta 4 dpa Fruit (SA2_D4_PL)17.14
S0703LA1589LA1589, Septum 4 dpa Fruit (SA1_D4_SE)19.65
S0704sunsun, Septum 4 dpa Fruit (SA2_D4_SE)17.89
S0705LA1589LA1589, Pericarp 4 dpa Fruit (SA1_D4_PE)18.2
S0706sunsun, Pericarp 4 dpa Fruit (SA2_D4_PE)15.13

Experiment: Transcriptome sequencing of leaves of resistant (RG-PtoR) and susceptible (RG-prf3 and RG-prf19) tomato plants treated with Pst DC3000
sample IDgenotype descriptionRPM
S0740Rio Grande-PtoRDC3000 4 h16.45
S0741Rio Grande-prf3DC3000 4 h27.69
S0742Rio Grande-prf19DC3000 4 h30.07
S0743Rio Grande-PtoRDC3000 6 h18.37
S0744Rio Grande-prf3DC3000 6 h31.97
S0745Rio Grande-prf19DC3000 6 h33.65

Experiment: Transcriptome sequencing of tomato leaves trated with diferent Pst DC3000 mutant strains
sample IDgenotype descriptionRPM
S0746Rio Grande-PtoRDC3000ΔhopQ1-1 ΔfliC 6 h18.32
S0747Rio Grande-PtoRDC3000ΔhopQ1-1 ΔavrPto ΔavrPtoB 6 h22.52
S0748Rio Grande-PtoRDC3000ΔhopQ1-1 ΔavrPto ΔavrPtoB ΔfliC 6 h24.31

Experiment: Transcriptome profiling of anthesis-stage ovaries from the fs8.1 backcrossed lines in Rio Grande background
sample IDgenotype descriptionRPM
S0749fs8.1, backcrossed line 09S204, BC4F2, Rio Grande background09S204-ee, ovary(anthesis)32.41
S0750WT, backcrossed line 09S204, BC4F2, Rio Grande background09S204-pp, ovary(anthesis)27.04
S0751fs8.1, backcrossed line 09S236, BC3F2, Rio Grande background09S236-ee, ovary(anthesis)36.64
S0752WT, backcrossed line 09S236, BC3F2, Rio Grande background09S236-pp, ovary(anthesis)35.95
S0753fs8.1, backcrossed line 09S237, BC1F4, Rio Grande background09S237-ee, ovary(anthesis)46.26
S0754WT, backcrossed line 09S237, BC1F4, Rio Grande background09S237-pp, ovary(anthesis)39.81

Experiment: Domain-wise effect of AvrPto on the tomato transcriptome 6 hours post inoculation
sample IDgenotype descriptionRPM
S0755Rio Grande-prf3D28E (pCPP45::avrPto) 6 h26.23
S0756Rio Grande-prf3D28E (pCPP45::avrPto I96A) 6 h25.1
S0757Rio Grande-prf3D28E (pCPP45::avrPto 2xA) 6 h25.37
S0758Rio Grande-prf3D28E (pCPP45::avrPto I96A + 2xA) 6 h23.82
S0759Rio Grande-prf3Mock 6 h25.4

Experiment: Transcriptome sequencing of Pti1 silenced plants after treatment of Pst DC3000ΔAvrPtoΔAvrPtoB
sample IDgenotype descriptionRPM
S0658Rio Grande prf3 (deletion in Prf)Azygous of hpPti1 DC3000ΔAvrPtoΔAvrPtoB 3 h20.23
S0659Rio Grande prf3 (deletion in Prf)hpPti1-F10 DC3000ΔAvrPtoΔAvrPtoB 3 h 20.87
S0660Rio Grande prf3 (deletion in Prf)hpPti1-F27 DC3000ΔAvrPtoΔAvrPtoB 3 h20.57
S0661Rio Grande prf3 (deletion in Prf)Azygous of hpPti1 DC3000ΔAvrPtoΔAvrPtoB 6 h25.73
S0662Rio Grande prf3 (deletion in Prf), hairpin Pti1, line F10hpPti1-F10 DC3000ΔAvrPtoΔAvrPtoB 6 h24.78
S0663Rio Grande prf3 (deletion in Prf), hairpin Pti1, line F27hpPti1-F27 ΔAvrPtoΔAvrPtoB 6 h26.82

Experiment: Gene expression in IM/FM, 2 dpi, 4 dpi and 6 dpi floral buds of wild type, lc, fas and lc/fas in the LA1589 background
sample IDgenotype descriptionRPM
S1087LA15892dpi floral buds236.79
S1088lc2dpi floral buds239.4
S1089fas2dpi floral buds218.91
S1090lc/fas2dpi floral buds214.78
S1091LA15894dpi floral buds212.81
S1092lc4dpi floral buds208.38
S1093fas4dpi floral buds196.31
S1094lc/fas4dpi floral buds208.76
S1095LA15896dpi floral buds218.36
S1096lc6dpi floral buds217.61
S1097fas6dpi floral buds254.08
S1098lc/fas6dpi floral buds217.76
S1099LA1589floral and inflorescence meristem247.23
S1100lcfloral and inflorescence meristem270.22
S1101fasfloral and inflorescence meristem237.66
S1102lc/fasfloral and inflorescence meristem228.39
S1103LA1589sympodial shoot apical meristem221.56
S1104lcsympodial shoot apical meristem240.12
S1105fassympodial shoot apical meristem246.96
S1106lc/fassympodial shoot apical meristem252.33

Experiment: RNA-Seq analysis on tomato anthesis flowers of ovate/sov1 NILs in the LA1589 background
sample IDgenotype descriptionRPM
S0764LA1589LA1589, flowers22.98
S0765ovateovate, flowers25.04
S0766sov1sov1, flowers24.4
S0767ovate/sov1ovate/sov1, flowers26.77

Experiment: Transcriptome profiling of three fruit tissues from the fw11.3 NILs in cultivated background
sample IDgenotype descriptionRPM
S0768Rio Grande (fw11.3-D)fw11.3-D Pericarp, 10 Days Post Anthesis31.2
S0769Rio Grande (fw11.3-D)fw11.3-D Septum and Placenta, 10 Days Post Anthesis33.61
S0770Rio Grande (fw11.3-D)fw11.3-D Columella, 10 Days Post Anthesis37.62
S0771Rio Grande (fw11.3-D)fw11.3-D Pericarp, 15 Days Post Anthesis44.28
S0772Rio Grande (fw11.3-D)fw11.3-D Septum and Placenta, 15 Days Post Anthesis38.95
S0773Rio Grande (fw11.3-D)fw11.3-D Columella, 15 Days Post Anthesis47.11
S0774Rio Grande (fw11.3-D)fw11.3-D Pericarp, 25 Days Post Anthesis48.62
S0775Rio Grande (fw11.3-D)fw11.3-D Septum and Placenta, 25 Days Post Anthesis35.32
S0776Rio Grande (fw11.3-D)fw11.3-D Columella, 25 Days Post Anthesis49.16
S0777Rio Grande (fw11.3-D)fw11.3-D Pericarp, 33 Days Post Anthesis39.67
S0778Rio Grande (fw11.3-D)fw11.3-D Septum and Placenta, 33 Days Post Anthesis38.83
S0779Rio Grande (fw11.3-D)fw11.3-D Columella, 33 Days Post Anthesis64.84
S0780Rio Grande (fw11.3-D)fw11.3-D Pericarp, 4 Days Post Anthesis32.61
S0781Rio Grande (fw11.3-D)fw11.3-D Septum, Placenta and Columella, 4 Days Post Anthesis37.28
S0782Rio Grande (fw11.3-D)fw11.3-D Pericarp, 7 Days Post Anthesis34.44
S0783Rio Grande (fw11.3-D)fw11.3-D Septum and Placenta, 7 Days Post Anthesis34.08
S0784Rio Grande (fw11.3-D)fw11.3-D Columella, 7 Days Post Anthesis44.73
S0785Rio Grande (fw11.3-D)fw11.3-D Pericarp, Turning94.56
S0786Rio Grande (fw11.3-D)fw11.3-D Septum and Placenta, Turning64.03
S0787Rio Grande (fw11.3-D)fw11.3-D Columella, Turning92.11
S0788Rio Grande (fw11.3-WT)fw11.3-WT Pericarp, 10 Days Post Anthesis32.93
S0789Rio Grande (fw11.3-WT)fw11.3-WT Septum and Placenta, 10 Days Post Anthesis34.83
S0790Rio Grande (fw11.3-WT)fw11.3-WT Columella, 10 Days Post Anthesis41.29
S0791Rio Grande (fw11.3-WT)fw11.3-WT Pericarp, 15 Days Post Anthesis39.16
S0792Rio Grande (fw11.3-WT)fw11.3-WT Septum and Placenta, 15 Days Post Anthesis40.1
S0793Rio Grande (fw11.3-WT)fw11.3-WT Columella, 15 Days Post Anthesis40.68
S0794Rio Grande (fw11.3-WT)fw11.3-WT Pericarp, 25 Days Post Anthesis39.45
S0795Rio Grande (fw11.3-WT)fw11.3-WT Septum and Placenta, 25 Days Post Anthesis33.05
S0796Rio Grande (fw11.3-WT)fw11.3-WT Columella, 25 Days Post Anthesis48.13
S0797Rio Grande (fw11.3-WT)fw11.3-WT Pericarp, 33 Days Post Anthesis50.07
S0798Rio Grande (fw11.3-WT)fw11.3-WT Septum and Placenta, 33 Days Post Anthesis49.44
S0799Rio Grande (fw11.3-WT)fw11.3-WT Columella, 33 Days Post Anthesis70.88
S0800Rio Grande (fw11.3-WT)fw11.3-WT Pericarp, 4 Days Post Anthesis33.87
S0801Rio Grande (fw11.3-WT)fw11.3-WT Septum, Placenta and Columella, 4 Days Post Anthesis43.12
S0802Rio Grande (fw11.3-WT)fw11.3-WT Pericarp, 7 Days Post Anthesis31.35
S0803Rio Grande (fw11.3-WT)fw11.3-WT Septum and Placenta, 7 Days Post Anthesis32.42
S0804Rio Grande (fw11.3-WT)fw11.3-WT Columella, 7 Days Post Anthesis36.84
S0805Rio Grande (fw11.3-WT)fw11.3-WT Pericarp, Turning85.95
S0806Rio Grande (fw11.3-WT)fw11.3-WT Septum and Placenta, Turning58.87
S0807Rio Grande (fw11.3-WT)fw11.3-WT Columella, Turning88.82

Experiment: Transcriptome profiling of three fruit tissues from the sun NILs in cultivated background
sample IDgenotype descriptionRPM
S0808Sun1642 (sun-WT)SA3 Pericarp and exocarp, 4 Days Post Anthesis23.58
S0809Sun1642 (sun-WT)SA3 Septum and seeds, 4 Days Post Anthesis25.42
S0810Sun1642 (sun-WT)SA3 Pericarp, 7 Days Post Anthesis23.75
S0811Sun1642 (sun-WT)SA3 Septum, 7 Days Post Anthesis26.01
S0812Sun1642 (sun-WT)SA3 Seeds, 7 Days Post Anthesis24.85
S0813Sun1642 (sun-WT)SA3 Pericarp, 10 Days Post Anthesis26.74
S0814Sun1642 (sun-WT)SA3 Septum, 10 Days Post Anthesis29.69
S0815Sun1642 (sun-WT)SA3 Seeds, 10 Days Post Anthesis25.5
S0816Sun1642 (sun-D)SA4 Pericarp and exocarp, 4 Days Post Anthesis27.48
S0817Sun1642 (sun-D)SA4 Septum and seeds, 4 Days Post Anthesis20.05
S0818Sun1642 (sun-D)SA4 Pericarp, 7 Days Post Anthesis22.65
S0819Sun1642 (sun-D)SA4 Septum, 7 Days Post Anthesis25.21
S0820Sun1642 (sun-D)SA4 Seeds, 7 Days Post Anthesis22.79
S0821Sun1642 (sun-D)SA4 Pericarp, 10 Days Post Anthesis27.71
S0822Sun1642 (sun-D)SA4 Septum, 10 Days Post Anthesis25.95
S0823Sun1642 (sun-D)SA4 Seeds, 10 Days Post Anthesis24.82

Experiment: Transcriptome profiling of ripe fruits of S. lycopersicoides ILs
sample IDgenotype descriptionRPM
S0824VF36fruit, red ripe, VF3633.38
S0825LA3882fruit, red ripe, S. lycopersicoides IL LA388245.49
S0826LA3886fruit, red ripe, S. lycopersicoides IL LA388640.49
S0827LA3892fruit, red ripe, S. lycopersicoides IL LA389238.8
S0828LA4230fruit, red ripe, S. lycopersicoides IL LA423034.02
S0829LA4231fruit, red ripe, S. lycopersicoides IL LA423135.91
S0830LA4232fruit, red ripe, S. lycopersicoides IL LA423249.35
S0831LA4233fruit, red ripe, S. lycopersicoides IL LA423343.18
S0832LA4234Afruit, red ripe, S. lycopersicoides IL LA4234A39.15
S0833LA4234Bfruit, red ripe, S. lycopersicoides IL LA4234B39.05
S0834LA4235fruit, red ripe, S. lycopersicoides IL LA423533.67
S0835LA4236Afruit, red ripe, S. lycopersicoides IL LA4236A45.31
S0836LA4237fruit, red ripe, S. lycopersicoides IL LA423743.24
S0837LA4238fruit, red ripe, S. lycopersicoides IL LA423836.43
S0838LA4239fruit, red ripe, S. lycopersicoides IL LA423936.33
S0839LA4241Afruit, red ripe, S. lycopersicoides IL LA4241A39.34
S0840LA4241Bfruit, red ripe, S. lycopersicoides IL LA4241B38
S0841LA4242Afruit, red ripe, S. lycopersicoides IL LA4242A37.25
S0842LA4242Bfruit, red ripe, S. lycopersicoides IL LA4242B36.45
S0843LA4242Cfruit, red ripe, S. lycopersicoides IL LA4242C39.34
S0844LA4243fruit, red ripe, S. lycopersicoides IL LA424346.61
S0845LA4244fruit, red ripe, S. lycopersicoides IL LA424438.43
S0846LA4245fruit, red ripe, S. lycopersicoides IL LA424531.71
S0847LA4247fruit, red ripe, S. lycopersicoides IL LA424736.9
S0848LA4248fruit, red ripe, S. lycopersicoides IL LA424839.69
S0849LA4249Afruit, red ripe, S. lycopersicoides IL LA4249A47.73
S0850LA4249Bfruit, red ripe, S. lycopersicoides IL LA4249B47.32
S0851LA4250Afruit, red ripe, S. lycopersicoides IL LA4250A44.97
S0852LA4250Bfruit, red ripe, S. lycopersicoides IL LA4250B28.86
S0853LA4250Cfruit, red ripe, S. lycopersicoides IL LA4250C43.8
S0854LA4251fruit, red ripe, S. lycopersicoides IL LA425143.61
S0855LA4252Afruit, red ripe, S. lycopersicoides IL LA4252A34.79
S0856LA4252Bfruit, red ripe, S. lycopersicoides IL LA4252B47.78
S0857LA4252Cfruit, red ripe, S. lycopersicoides IL LA4252C37.05
S0858LA4252Efruit, red ripe, S. lycopersicoides IL LA4252E39.48
S0859LA4252Ffruit, red ripe, S. lycopersicoides IL LA4252F42.73
S0860LA4253fruit, red ripe, S. lycopersicoides IL LA425338.72
S0861LA4254fruit, red ripe, S. lycopersicoides IL LA425445.29
S0862LA4255fruit, red ripe, S. lycopersicoides IL LA425538.94
S0863LA4256fruit, red ripe, S. lycopersicoides IL LA425635.99
S0864LA4257fruit, red ripe, S. lycopersicoides IL LA425743.6
S0865LA4258fruit, red ripe, S. lycopersicoides IL LA425829.56
S0866LA4260fruit, red ripe, S. lycopersicoides IL LA426038.06
S0867LA4262Afruit, red ripe, S. lycopersicoides IL LA4262A49.21
S0868LA4262Bfruit, red ripe, S. lycopersicoides IL LA4262B33.61
S0869LA4263Afruit, red ripe, S. lycopersicoides IL LA4263A58.06
S0870LA4263Bfruit, red ripe, S. lycopersicoides IL LA4263B46.29
S0871LA4263Cfruit, red ripe, S. lycopersicoides IL LA4263C38.85
S0872LA4263Dfruit, red ripe, S. lycopersicoides IL LA4263D34.6
S0873LA4264Afruit, red ripe, S. lycopersicoides IL LA4264A62.75
S0874LA4264Bfruit, red ripe, S. lycopersicoides IL LA4264B47.85
S0875LA4266Afruit, red ripe, S. lycopersicoides IL LA4266A30.97
S0876LA4266Bfruit, red ripe, S. lycopersicoides IL LA4266B20.29
S0877LA4268fruit, red ripe, S. lycopersicoides IL LA426838.73
S0878LA4269fruit, red ripe, S. lycopersicoides IL LA426937.06
S0879LA4270Afruit, red ripe, S. lycopersicoides IL LA4270A40.2
S0880LA4270Bfruit, red ripe, S. lycopersicoides IL LA4270B35.73
S0881LA4272fruit, red ripe, S. lycopersicoides IL LA427238.42
S0882LA4273fruit, red ripe, S. lycopersicoides IL LA427337.31
S0883LA4274fruit, red ripe, S. lycopersicoides IL LA427442.84
S0884LA4275fruit, red ripe, S. lycopersicoides IL LA427542.53
S0885LA4276Afruit, red ripe, S. lycopersicoides IL LA4276A33.56
S0886LA4276Bfruit, red ripe, S. lycopersicoides IL LA4276B40.08
S0887LA4276Cfruit, red ripe, S. lycopersicoides IL LA4276C41.27
S0888LA4276Dfruit, red ripe, S. lycopersicoides IL LA4276D47.36
S0889LA4277fruit, red ripe, S. lycopersicoides IL LA427737.06
S0890LA4277Bfruit, red ripe, S. lycopersicoides IL LA4277B31.65
S0891LA4277Cfruit, red ripe, S. lycopersicoides IL LA4277C37.73
S0892LA4278Afruit, red ripe, S. lycopersicoides IL LA4278A19.27
S0893LA4278Bfruit, red ripe, S. lycopersicoides IL LA4278B19.81
S0894LA4279fruit, red ripe, S. lycopersicoides IL LA427940.88
S0895LA4280fruit, red ripe, S. lycopersicoides IL LA428044.01
S0896LA4281Afruit, red ripe, S. lycopersicoides IL LA4281A44.69
S0897LA4281Bfruit, red ripe, S. lycopersicoides IL LA4281B38.69
S0898LA4281Cfruit, red ripe, S. lycopersicoides IL LA4281C39.48
S0899LA4281Dfruit, red ripe, S. lycopersicoides IL LA4281D44.99
S0900LA4281Efruit, red ripe, S. lycopersicoides IL LA4281E31.92
S0901LA4282Afruit, red ripe, S. lycopersicoides IL LA4282A29.37
S0902LA4282Bfruit, red ripe, S. lycopersicoides IL LA4282B34.25
S0903LA4282Cfruit, red ripe, S. lycopersicoides IL LA4282C40.12
S0904LA4284fruit, red ripe, S. lycopersicoides IL LA428438.08
S0905LA4294Afruit, red ripe, S. lycopersicoides IL LA4294A41.64
S0906LA4294Bfruit, red ripe, S. lycopersicoides IL LA4294B32.44
S0907LA4295fruit, red ripe, S. lycopersicoides IL LA429536.66
S0908LA4296fruit, red ripe, S. lycopersicoides IL LA429639.6
S0909LA4297fruit, red ripe, S. lycopersicoides IL LA429734.78
S0910LA4298fruit, red ripe, S. lycopersicoides IL LA429847.67
S0911LA4299fruit, red ripe, S. lycopersicoides IL LA429938.29
S0912LA4300Afruit, red ripe, S. lycopersicoides IL LA4300A47.94
S0913LA4300Bfruit, red ripe, S. lycopersicoides IL LA4300B52.16
S0914LA4301Afruit, red ripe, S. lycopersicoides IL LA4301A43.32
S0915LA4303fruit, red ripe, S. lycopersicoides IL LA430336.39
S0916LA4305fruit, red ripe, S. lycopersicoides IL LA430540.51
S0917LA4306Afruit, red ripe, S. lycopersicoides IL LA4306A53.59
S0918LA4306Bfruit, red ripe, S. lycopersicoides IL LA4306B42.39
S0919LA4307fruit, red ripe, S. lycopersicoides IL LA430746.44
S0920LA4308fruit, red ripe, S. lycopersicoides IL LA430835.95
S0921LA4308Afruit, red ripe, S. lycopersicoides IL LA4308A36.03
S0922LA4309fruit, red ripe, S. lycopersicoides IL LA430946.49
S0923LA4310fruit, red ripe, S. lycopersicoides IL LA431046.87
S0924LA4311fruit, red ripe, S. lycopersicoides IL LA431139.37
S0925LA4312Afruit, red ripe, S. lycopersicoides IL LA4312A39.12
S0926LA4312Bfruit, red ripe, S. lycopersicoides IL LA4312B39.44
S0927LA4313Afruit, red ripe, S. lycopersicoides IL LA4313A48.54
S0928LA4313Bfruit, red ripe, S. lycopersicoides IL LA4313B48

Experiment: Transcriptome profiling of ripe fruits of S. pimpinellifolium RILs
sample IDgenotype descriptionRPM
S0953LA2093fruit, red ripe, S. pimpinellifolium LA209350.73
S0954NCEBR1fruit, red ripe, S. lycopersicum NCEBR149.7
S0955RIL-1fruit, red ripe, S. pimpinellifolium RIL-140.89
S0956RIL-3fruit, red ripe, S. pimpinellifolium RIL-344.86
S0957RIL-4fruit, red ripe, S. pimpinellifolium RIL-439.26
S0958RIL-5fruit, red ripe, S. pimpinellifolium RIL-555.27
S0959RIL-6fruit, red ripe, S. pimpinellifolium RIL-643.76
S0960RIL-7fruit, red ripe, S. pimpinellifolium RIL-744.83
S0961RIL-11fruit, red ripe, S. pimpinellifolium RIL-1148
S0962RIL-12fruit, red ripe, S. pimpinellifolium RIL-1246.75
S0963RIL-13fruit, red ripe, S. pimpinellifolium RIL-1340.14
S0964RIL-14fruit, red ripe, S. pimpinellifolium RIL-1452.27
S0965RIL-16fruit, red ripe, S. pimpinellifolium RIL-1642.66
S0966RIL-18fruit, red ripe, S. pimpinellifolium RIL-1852.51
S0967RIL-19fruit, red ripe, S. pimpinellifolium RIL-1949.22
S0968RIL-20fruit, red ripe, S. pimpinellifolium RIL-2046.32
S0969RIL-21fruit, red ripe, S. pimpinellifolium RIL-2153.25
S0970RIL-22fruit, red ripe, S. pimpinellifolium RIL-2254.65
S0971RIL-23fruit, red ripe, S. pimpinellifolium RIL-2331.02
S0972RIL-24fruit, red ripe, S. pimpinellifolium RIL-2435.21
S0973RIL-25fruit, red ripe, S. pimpinellifolium RIL-2551.39
S0974RIL-26fruit, red ripe, S. pimpinellifolium RIL-2634.75
S0975RIL-27fruit, red ripe, S. pimpinellifolium RIL-2733.76
S0976RIL-28fruit, red ripe, S. pimpinellifolium RIL-2855.62
S0977RIL-30fruit, red ripe, S. pimpinellifolium RIL-3030.3
S0978RIL-31fruit, red ripe, S. pimpinellifolium RIL-3144.96
S0979RIL-32fruit, red ripe, S. pimpinellifolium RIL-3252.49
S0980RIL-33fruit, red ripe, S. pimpinellifolium RIL-3340.08
S0981RIL-34fruit, red ripe, S. pimpinellifolium RIL-3435.83
S0982RIL-35fruit, red ripe, S. pimpinellifolium RIL-3549.23
S0983RIL-37fruit, red ripe, S. pimpinellifolium RIL-3741.01
S0984RIL-38fruit, red ripe, S. pimpinellifolium RIL-3844.05
S0985RIL-39fruit, red ripe, S. pimpinellifolium RIL-3930.72
S0986RIL-41fruit, red ripe, S. pimpinellifolium RIL-4144.62
S0987RIL-43fruit, red ripe, S. pimpinellifolium RIL-4346.6
S0988RIL-45fruit, red ripe, S. pimpinellifolium RIL-4533.26
S0989RIL-47fruit, red ripe, S. pimpinellifolium RIL-4738.82
S0990RIL-48fruit, red ripe, S. pimpinellifolium RIL-4831.82
S0991RIL-49fruit, red ripe, S. pimpinellifolium RIL-4931.16
S0992RIL-50fruit, red ripe, S. pimpinellifolium RIL-5025.71
S0993RIL-52fruit, red ripe, S. pimpinellifolium RIL-5240.59
S0994RIL-53fruit, red ripe, S. pimpinellifolium RIL-5346.6
S0995RIL-54fruit, red ripe, S. pimpinellifolium RIL-5439.29
S0996RIL-55fruit, red ripe, S. pimpinellifolium RIL-5541.78
S0997RIL-56fruit, red ripe, S. pimpinellifolium RIL-5633.55
S0998RIL-57fruit, red ripe, S. pimpinellifolium RIL-5732.49
S0999RIL-58fruit, red ripe, S. pimpinellifolium RIL-5834.14
S1000RIL-62fruit, red ripe, S. pimpinellifolium RIL-6245.1
S1001RIL-63fruit, red ripe, S. pimpinellifolium RIL-6342.55
S1002RIL-65fruit, red ripe, S. pimpinellifolium RIL-6545.07
S1003RIL-66fruit, red ripe, S. pimpinellifolium RIL-6631.97
S1004RIL-67fruit, red ripe, S. pimpinellifolium RIL-6748.44
S1005RIL-68fruit, red ripe, S. pimpinellifolium RIL-6852.51
S1006RIL-69fruit, red ripe, S. pimpinellifolium RIL-6947.31
S1007RIL-71fruit, red ripe, S. pimpinellifolium RIL-7142.05
S1008RIL-72fruit, red ripe, S. pimpinellifolium RIL-7245.38
S1009RIL-73fruit, red ripe, S. pimpinellifolium RIL-7356.46
S1010RIL-75fruit, red ripe, S. pimpinellifolium RIL-7545.88
S1011RIL-76fruit, red ripe, S. pimpinellifolium RIL-7669.69
S1012RIL-77fruit, red ripe, S. pimpinellifolium RIL-7741.32
S1013RIL-78fruit, red ripe, S. pimpinellifolium RIL-7851.55
S1014RIL-79fruit, red ripe, S. pimpinellifolium RIL-7963.65
S1015RIL-80fruit, red ripe, S. pimpinellifolium RIL-8042.37
S1016RIL-81fruit, red ripe, S. pimpinellifolium RIL-8155.32
S1017RIL-84fruit, red ripe, S. pimpinellifolium RIL-8434.28
S1018RIL-85fruit, red ripe, S. pimpinellifolium RIL-8530.52
S1019RIL-88fruit, red ripe, S. pimpinellifolium RIL-8846.9
S1020RIL-90fruit, red ripe, S. pimpinellifolium RIL-9047.31
S1021RIL-91fruit, red ripe, S. pimpinellifolium RIL-9143.47
S1022RIL-95fruit, red ripe, S. pimpinellifolium RIL-9557.84
S1023RIL-96fruit, red ripe, S. pimpinellifolium RIL-9649.07
S1024RIL-97fruit, red ripe, S. pimpinellifolium RIL-9745.21
S1025RIL-98fruit, red ripe, S. pimpinellifolium RIL-9860.29
S1026RIL-99fruit, red ripe, S. pimpinellifolium RIL-9962.87
S1027RIL-100fruit, red ripe, S. pimpinellifolium RIL-10045.72
S1028RIL-101fruit, red ripe, S. pimpinellifolium RIL-10143.45
S1029RIL-102fruit, red ripe, S. pimpinellifolium RIL-10261.77
S1030RIL-103fruit, red ripe, S. pimpinellifolium RIL-10364.47
S1031RIL-105fruit, red ripe, S. pimpinellifolium RIL-10548.84
S1032RIL-107fruit, red ripe, S. pimpinellifolium RIL-10739.23
S1033RIL-108fruit, red ripe, S. pimpinellifolium RIL-10834.47
S1034RIL-109fruit, red ripe, S. pimpinellifolium RIL-10929.87
S1035RIL-111fruit, red ripe, S. pimpinellifolium RIL-11142.78
S1036RIL-112fruit, red ripe, S. pimpinellifolium RIL-11246.48
S1037RIL-113fruit, red ripe, S. pimpinellifolium RIL-11351.93
S1038RIL-114fruit, red ripe, S. pimpinellifolium RIL-11462.84
S1039RIL-115fruit, red ripe, S. pimpinellifolium RIL-11541.32
S1040RIL-116fruit, red ripe, S. pimpinellifolium RIL-11662.77
S1041RIL-117fruit, red ripe, S. pimpinellifolium RIL-11757.26
S1042RIL-118fruit, red ripe, S. pimpinellifolium RIL-11838.66
S1043RIL-120fruit, red ripe, S. pimpinellifolium RIL-12043.99
S1044RIL-121fruit, red ripe, S. pimpinellifolium RIL-12141.47
S1045RIL-122fruit, red ripe, S. pimpinellifolium RIL-12240.63
S1046RIL-123fruit, red ripe, S. pimpinellifolium RIL-12327.69
S1047RIL-124fruit, red ripe, S. pimpinellifolium RIL-12442.14
S1048RIL-125fruit, red ripe, S. pimpinellifolium RIL-12532.58
S1049RIL-126fruit, red ripe, S. pimpinellifolium RIL-12649.82
S1050RIL-128fruit, red ripe, S. pimpinellifolium RIL-12852.76
S1051RIL-129fruit, red ripe, S. pimpinellifolium RIL-12927.77
S1052RIL-130fruit, red ripe, S. pimpinellifolium RIL-13067.33
S1053RIL-131fruit, red ripe, S. pimpinellifolium RIL-13145.74
S1054RIL-132fruit, red ripe, S. pimpinellifolium RIL-13242.6
S1055RIL-133fruit, red ripe, S. pimpinellifolium RIL-13353.88
S1056RIL-134fruit, red ripe, S. pimpinellifolium RIL-13445.16
S1057RIL-135fruit, red ripe, S. pimpinellifolium RIL-13548.65
S1058RIL-137fruit, red ripe, S. pimpinellifolium RIL-13750.07
S1059RIL-139fruit, red ripe, S. pimpinellifolium RIL-13940.55
S1060RIL-140fruit, red ripe, S. pimpinellifolium RIL-14051.4
S1061RIL-142fruit, red ripe, S. pimpinellifolium RIL-14246.38
S1062RIL-143fruit, red ripe, S. pimpinellifolium RIL-14350.81
S1063RIL-144fruit, red ripe, S. pimpinellifolium RIL-14449.16
S1064RIL-145fruit, red ripe, S. pimpinellifolium RIL-14547.02
S1065RIL-146fruit, red ripe, S. pimpinellifolium RIL-14641.12
S1066RIL-147fruit, red ripe, S. pimpinellifolium RIL-14740.78
S1067RIL-148fruit, red ripe, S. pimpinellifolium RIL-14855.57
S1068RIL-149fruit, red ripe, S. pimpinellifolium RIL-14960.16
S1069RIL-150fruit, red ripe, S. pimpinellifolium RIL-15051.01
S1070RIL-151fruit, red ripe, S. pimpinellifolium RIL-15163.96
S1071RIL-152fruit, red ripe, S. pimpinellifolium RIL-15245.02
S1072RIL-153fruit, red ripe, S. pimpinellifolium RIL-15328.42
S1073RIL-154fruit, red ripe, S. pimpinellifolium RIL-15444.71
S1074RIL-155fruit, red ripe, S. pimpinellifolium RIL-15567.16
S1075RIL-156fruit, red ripe, S. pimpinellifolium RIL-15660.1
S1076RIL-159fruit, red ripe, S. pimpinellifolium RIL-15933.24
S1077RIL-160fruit, red ripe, S. pimpinellifolium RIL-16041.44
S1078RIL-161fruit, red ripe, S. pimpinellifolium RIL-16156.75
S1079RIL-162fruit, red ripe, S. pimpinellifolium RIL-16237.26
S1080RIL-164fruit, red ripe, S. pimpinellifolium RIL-16438.62
S1081RIL-165fruit, red ripe, S. pimpinellifolium RIL-16544.52
S1082RIL-167fruit, red ripe, S. pimpinellifolium RIL-16737.69
S1083RIL-168fruit, red ripe, S. pimpinellifolium RIL-16831.59
S1084RIL-169fruit, red ripe, S. pimpinellifolium RIL-16938.91
S1085RIL-171fruit, red ripe, S. pimpinellifolium RIL-17136.06
S1086RIL-172fruit, red ripe, S. pimpinellifolium RIL-17235.41

Experiment: Transcriptome profiling of fruit of cultivated and wild tomatoes
sample IDgenotype descriptionRPM
S1107LA0816 (VF-145)LA0816 immature green fruit25.22
S1108LA0816 (VF-145)LA0816 mature green fruit32.38
S1109LA0816 (VF-145)LA0816 breaker fruit51.82
S1110LA0816 (VF-145)LA0816 ripe fruit35.87
S1111LA1563LA1563 immature green fruit23.78
S1112LA1563LA1563 mature green fruit30.19
S1113LA1563LA1563 breaker fruit50.59
S1114LA1563LA1563 ripe fruit50.28
S1115BD-MPBD-MP immature green fruit32.74
S1116BD-MPBD-MP mature green fruit31.77
S1117BD-MPBD-MP breaker fruit60.77
S1118BD-MPBD-MP ripe fruit63.4
S1119BD-MTBD-MT immature green fruit24.3
S1120BD-MTBD-MT mature green fruit31.72
S1121BD-MTBD-MT breaker fruit55.34
S1122BD-MTBD-MT ripe fruit54.02
S1123LA1306LA1306 immature green fruit50.61
S1124LA1306LA1306 mature green fruit45.68
S1125LA1306LA1306 breaker fruit75.26
S1126LA1306LA1306 ripe fruit42.93
S1127LA1412LA1412 immature green fruit51.77
S1128LA1412LA1412 mature green fruit46.88
S1129LA1412LA1412 breaker fruit41
S1130LA1412LA1412 ripe fruit85.41
S1131LA1586LA1586 immature green fruit45.62
S1132LA1586LA1586 mature green fruit37.51
S1133LA1586LA1586 breaker fruit31.34
S1134LA1586LA1586 ripe fruit52.59
S1135LA1589LA1589 immature green fruit34.71
S1136LA1589LA1589 mature green fruit32.52
S1137LA1589LA1589 breaker fruit96.23
S1138LA1589LA1589 ripe fruit49.62
S1139LA1028LA1028 immature green fruit34.72
S1141LA1028LA1028 breaker fruit77.61
S1142LA1028LA1028 ripe fruit59.13
S1143LA1318LA1318 immature green fruit35.25
S1144LA1318LA1318 mature green fruit43.51
S1145LA1318LA1318 breaker fruit81.22
S1146LA1318LA1318 ripe fruit107.92
S1147BD-732BD-732 immature green fruit49.43
S1148BD-732BD-732 mature green fruit32.53
S1149BD-732BD-732 breaker fruit94.53
S1150BD-732BD-732 ripe fruit71.79
S1151LA0407LA0407 immature green fruit44.09
S1152LA0407LA0407 mature green fruit48.97
S1153LA0407LA0407 breaker fruit31.99
S1154LA0407LA0407 ripe fruit40.94
S1155LA1777LA1777 immature green fruit42.33
S1156LA1777LA1777 mature green fruit48.34
S1157LA1777LA1777 breaker fruit58.72
S1158LA1777LA1777 ripe fruit47.35
S1159LA0716LA0716 immature green fruit55.05
S1160LA0716LA0716 mature green fruit59.81
S1161LA0716LA0716 breaker fruit51.7
S1162LA0716LA0716 ripe fruit90.78
S1163PI126431PI126431 immature green fruit48.49
S1164PI126431PI126431 mature green fruit108.03
S1165PI126431PI126431 breaker fruit77.06
S1166PI126431PI126431 ripe fruit86.14
S1167PI126926PI126926 immature green fruit46.45
S1168PI126926PI126926 mature green fruit78.46
S1169PI126926PI126926 breaker fruit55.6
S1170PI126926PI126926 ripe fruit76.72
S1171LA1584LA1584 ripe fruit34.34
S1172LA2173LA2173 ripe fruit37.27
S1173LA1301LA1301 ripe fruit50.33
S1174LA1335LA1335 ripe fruit41.24
S1175LA1371LA1371 ripe fruit37.16
S1176LA1521LA1521 ripe fruit42.6
S1177LA1659LA1659 ripe fruit35.39
S1178LA0722LA0722 ripe fruit41.3
S1179LA1547LA1547 ripe fruit18.63
S1180LA3123LA3123 ripe fruit44.57
S1181LA2096LA2096 ripe fruit45.37
S1182LA1246LA1246 ripe fruit57.51
S1183LA1259LA1259 ripe fruit34.31
S1184LA2093LA2093 ripe fruit56.55
S1185LA0418LA0418 ripe fruit56.54
S1186LA2850LA2850 ripe fruit30.63
S1187LA1043LA1043 ripe fruit25.15
S1188LA0438LA0438 ripe fruit73.43
S1189LA0532LA0532 ripe fruit55.71
S1190LA1044LA1044 ripe fruit57.01
S1191LA1452LA1452 ripe fruit74.94
S1192LA0528LA0528 ripe fruit56.46
S1193LA0530LA0530 ripe fruit70.64
S1194LA0480ALA0480A ripe fruit96.91
S1195LA0521LA0521 ripe fruit50.16
S1196LA0422LA0422 ripe fruit46.32
S1197LA0529LA0529 ripe fruit48.44
S1198LA1039LA1039 ripe fruit42.52
S1199LA1042LA1042 ripe fruit39.51
S1200LA1407LA1407 ripe fruit56.79
S1201LA1035LA1035 ripe fruit39.18