Solyc09g061860 expression

Experiment: Transcriptome profiling of pennellii ILs
sample IDgenotype descriptionRPM
S0001M82fruit, red ripe, M822.45
S00021-1fruit, red ripe, S. pennellii IL1-12.5
S00031-1-2fruit, red ripe, S. pennellii IL1-1-22.09
S00041-1-3fruit, red ripe, S. pennellii IL1-1-31.62
S00051-2fruit, red ripe, S. pennellii IL1-22.2
S00061-3fruit, red ripe, S. pennellii IL1-31.67
S00071-4fruit, red ripe, S. pennellii IL1-41.51
S00081-4-18fruit, red ripe, S. pennellii IL1-4-181.57
S00092-1fruit, red ripe, S. pennellii IL2-11.95
S00102-1-1fruit, red ripe, S. pennellii IL2-1-12.2
S00112-2fruit, red ripe, S. pennellii IL2-21.52
S00122-3fruit, red ripe, S. pennellii IL2-32.21
S00132-4fruit, red ripe, S. pennellii IL2-41.33
S00142-5fruit, red ripe, S. pennellii IL2-52.17
S00152-6fruit, red ripe, S. pennellii IL2-61.89
S00162-6-5fruit, red ripe, S. pennellii IL2-6-51.6
S00173-1fruit, red ripe, S. pennellii IL3-11.83
S00183-2fruit, red ripe, S. pennellii IL3-22.59
S00203-4fruit, red ripe, S. pennellii IL3-41.88
S00213-5fruit, red ripe, S. pennellii IL3-51.7
S00224-1fruit, red ripe, S. pennellii IL4-11.82
S00234-1-1fruit, red ripe, S. pennellii IL4-1-11.92
S00244-2fruit, red ripe, S. pennellii IL4-22.25
S00254-3fruit, red ripe, S. pennellii IL4-31.71
S00264-3-2fruit, red ripe, S. pennellii IL4-3-21.44
S00274-4fruit, red ripe, S. pennellii IL4-42.27
S00285-1fruit, red ripe, S. pennellii IL5-11.93
S00295-2fruit, red ripe, S. pennellii IL5-21.97
S00305-3fruit, red ripe, S. pennellii IL5-33.06
S00315-4fruit, red ripe, S. pennellii IL5-42.34
S00325-5fruit, red ripe, S. pennellii IL5-51.85
S00346-2fruit, red ripe, S. pennellii IL6-21.05
S00356-2-2fruit, red ripe, S. pennellii IL6-2-21.05
S00366-3fruit, red ripe, S. pennellii IL6-32.16
S00376-4fruit, red ripe, S. pennellii IL6-42.02
S00387-1fruit, red ripe, S. pennellii IL7-12.09
S00397-2fruit, red ripe, S. pennellii IL7-21.55
S00407-3fruit, red ripe, S. pennellii IL7-31.77
S00417-4fruit, red ripe, S. pennellii IL7-41.98
S00427-4-1fruit, red ripe, S. pennellii IL7-4-12.54
S00437-5fruit, red ripe, S. pennellii IL7-52.76
S00447-5-5fruit, red ripe, S. pennellii IL7-5-51.93
S00458-1fruit, red ripe, S. pennellii IL8-12.55
S00468-1-1fruit, red ripe, S. pennellii IL8-1-12.49
S00478-1-5fruit, red ripe, S. pennellii IL8-1-52.03
S00488-2fruit, red ripe, S. pennellii IL8-21.84
S00498-2-1fruit, red ripe, S. pennellii IL8-2-11.74
S00508-3fruit, red ripe, S. pennellii IL8-31.3
S00518-3-1fruit, red ripe, S. pennellii IL8-3-11.64
S00529-1fruit, red ripe, S. pennellii IL9-12.28
S00539-1-2fruit, red ripe, S. pennellii IL9-1-21.92
S00549-1-3fruit, red ripe, S. pennellii IL9-1-31.82
S00559-2fruit, red ripe, S. pennellii IL9-20.09
S00569-2-5fruit, red ripe, S. pennellii IL9-2-51.89
S00579-2-6fruit, red ripe, S. pennellii IL9-2-61.92
S00589-3fruit, red ripe, S. pennellii IL9-32.41
S00599-3-1fruit, red ripe, S. pennellii IL9-3-11.05
S00609-3-2fruit, red ripe, S. pennellii IL9-3-21.28
S006110-1fruit, red ripe, S. pennellii IL10-11.49
S006210-1-1fruit, red ripe, S. pennellii IL10-1-12.01
S006310-2fruit, red ripe, S. pennellii IL10-22.08
S006410-2-2fruit, red ripe, S. pennellii IL10-2-21.12
S006510-3fruit, red ripe, S. pennellii IL10-31.63
S006611-1fruit, red ripe, S. pennellii IL11-11.28
S006711-2fruit, red ripe, S. pennellii IL11-21.41
S006811-3fruit, red ripe, S. pennellii IL11-31.97
S006911-4fruit, red ripe, S. pennellii IL11-41.67
S007011-4-1fruit, red ripe, S. pennellii IL11-4-11.09
S007112-1fruit, red ripe, S. pennellii IL12-11.42
S007212-1-1fruit, red ripe, S. pennellii IL12-1-11.75
S007312-2fruit, red ripe, S. pennellii IL12-21.32
S007412-3fruit, red ripe, S. pennellii IL12-31.39
S007512-3-1fruit, red ripe, S. pennellii IL12-3-11.15
S007612-4fruit, red ripe, S. pennellii IL12-41.27
S007712-4-1fruit, red ripe, S. pennellii IL12-4-11.5

Experiment: Transcriptome analysis of various tissues in tomato cultivar Heinz and the wild relative Solanum pimpinellifolium
sample IDgenotype descriptionRPM
S0584HeinzHeinz unopened flower buds37.77
S0585HeinzHeinz fully opened flowers18.39
S0586HeinzHeinz 1 cm fruits94.13
S0587HeinzHeinz 2 cm fruits48.96
S0588HeinzHeinz 3 cm fruits23.02
S0589HeinzHeinz mature green fruits4.53
S0590HeinzHeinz breaker fruits2.57
S0591HeinzHeinz breaker+10 fruits1.36
S0592HeinzHeinz roots16.03
S0593HeinzHeinz leaves30.54
S0594pimpinellifolium immature green fruits4.37
S0595pimpinellifolium breaker fruits3.2
S0596pimpinellifolium breaker+5 fruits2.18
S0597pimpinellifolium leaves26.18

Experiment: Transcriptome profiling of young flower buds of WT, sun, ovate and fs8.1 NILs in the LA1589 background
sample IDgenotype descriptionRPM
S0929LA1589LA1589 young flower buds at 4 days post-initiation of floral meristem43.6
S0930LA1589LA1589 young flower buds at 6 days post-initiation of floral meristem43.75
S0931LA1589LA1589 young flower buds at 8 days post-initiation of floral meristem39.81
S0932LA1589LA1589 young flower buds at 10 days post-initiation of floral meristem54.59
S0933LA1589LA1589 young flower buds at 13 days post-initiation of floral meristem36.93
S0934LA1589LA1589 young flower buds at 16 days post-initiation of floral meristem25.03
S0935sun NIL in the LA1589 backgroundsun young flower buds at 4 days post-initiation of floral meristem48.2
S0936sun NIL in the LA1589 backgroundsun young flower buds at 6 days post-initiation of floral meristem44.28
S0937sun NIL in the LA1589 backgroundsun young flower buds at 8 days post-initiation of floral meristem41.52
S0938sun NIL in the LA1589 backgroundsun young flower buds at 10 days post-initiation of floral meristem61.2
S0939sun NIL in the LA1589 backgroundsun young flower buds at 13 days post-initiation of floral meristem40.53
S0940sun NIL in the LA1589 backgroundsun young flower buds at 16 days post-initiation of floral meristem16.79
S0941ovate NIL in the LA1589 backgroundovate young flower buds at 4 days post-initiation of floral meristem44.44
S0942ovate NIL in the LA1589 backgroundovate young flower buds at 6 days post-initiation of floral meristem43
S0943ovate NIL in the LA1589 backgroundovate young flower buds at 8 days post-initiation of floral meristem42.76
S0944ovate NIL in the LA1589 backgroundovate young flower buds at 10 days post-initiation of floral meristem58.68
S0945ovate NIL in the LA1589 backgroundovate young flower buds at 13 days post-initiation of floral meristem31.73
S0946ovate NIL in the LA1589 backgroundovate young flower buds at 16 days post-initiation of floral meristem28.79
S0947fs8.1 NIL in the LA1589 backgroundfs8.1 young flower buds at 4 days post-initiation of floral meristem45.27
S0948fs8.1 NIL in the LA1589 backgroundfs8.1 young flower buds at 6 days post-initiation of floral meristem42.64
S0949fs8.1 NIL in the LA1589 backgroundfs8.1 young flower buds at 8 days post-initiation of floral meristem40.79
S0950fs8.1 NIL in the LA1589 backgroundfs8.1 young flower buds at 10 days post-initiation of floral meristem57.17
S0951fs8.1 NIL in the LA1589 backgroundfs8.1 young flower buds at 13 days post-initiation of floral meristem28.55
S0952fs8.1 NIL in the LA1589 backgroundfs8.1 young flower buds at 16 days post-initiation of floral meristem22.27

Experiment: Transcriptome analysis of various tissues in wild species S. pimpinellifolium, LA1589
sample IDgenotype descriptionRPM
S0608LA1589anthesis flowers (0DPA)130.77
S0609LA158910 days post anthesis fruit (10 DPA1)375.93
S0610LA158910 days post anthesis fruit 2 (10 DPA2)568.45
S0611LA158920 days post anthesis fruit (20DPA)60.48
S0612LA1589rippening fruit (33DPA)26.68
S0613LA1589cotyledons (COTYL)492.76
S0614LA1589hypocotyl (HYPO)461.53
S0615LA1589vegitative meristems (MERI)426.35
S0616LA1589mature leaves (ML)413.13
S0617LA1589whole root (ROOT)144.24
S0618LA1589young flower buds (YFB)428.09
S0619LA1589young leaves (YL)432.37

Experiment: Transcriptome sequencing of tomato leaves treated with different bacteria and PAMPs
sample IDgenotype descriptionRPM
S0620Rio Grande prf3 (deletion in Prf)mock PAMPs 30 min10.87
S0621Rio Grande prf3 (deletion in Prf)cold shock protein 22 (csp22) 30 min7.43
S0622Rio Grande prf3 (deletion in Prf)flagellin 22 (flg22) 30 min8.6
S0623Rio Grande prf3 (deletion in Prf)flagellin II-28 (flgII-28) 30 min6.03
S0624Rio Grande prf3 (deletion in Prf)Lipopolysaccharides (LPS) 30 min9.27
S0625Rio Grande prf3 (deletion in Prf)Peptidoglycan (PGN) 30 min9.49
S0626Rio Grande prf3 (deletion in Prf)mock PAMPs 6h8.5
S0627Rio Grande prf3 (deletion in Prf)cold shock protein 22 (csp22) 6 h5.21
S0628Rio Grande prf3 (deletion in Prf)flagellin 22 (flg22) 6h5.75
S0629Rio Grande prf3 (deletion in Prf)flagellin II-28 (flgII-28) 6h6.67
S0630Rio Grande prf3 (deletion in Prf)Lipopolysaccharides (LPS) 6 h6.09
S0631Rio Grande prf3 (deletion in Prf)Peptidoglycan (PGN) 6h 5.94
S0632Rio Grande prf3 (deletion in Prf)mock bacteria 30 min7.9
S0633Rio Grande prf3 (deletion in Prf)DC3000 30 min12.28
S0634Rio Grande prf3 (deletion in Prf)DC3000ΔhrcQ-U 30 min8.92
S0635Rio Grande prf3 (deletion in Prf)DC3000ΔhrcQ-UΔfliC 30 min7.95
S0636Rio Grande prf3 (deletion in Prf)DC3000Δ28 30 min9.18
S0637Rio Grande prf3 (deletion in Prf)DC3000ΔAvrPtoΔAvrPtoB 30 min9.14
S0638Rio Grande prf3 (deletion in Prf)Pseudomonas fluorescens 30 min10.67
S0639Rio Grande prf3 (deletion in Prf)Pseudomonas putida 30 min8.76
S0640Rio Grande prf3 (deletion in Prf)Agrobacterium tumefaciens 30 min8.15
S0641Rio Grande prf3 (deletion in Prf)mock bacteria 6 h7.19
S0642Rio Grande prf3 (deletion in Prf)DC3000 6 h17.34
S0643Rio Grande prf3 (deletion in Prf)DC3000ΔhrcQ-U 6 h7.94
S0644Rio Grande prf3 (deletion in Prf)DC3000ΔhrcQ-UΔfliC 6 h22.09
S0645Rio Grande prf3 (deletion in Prf)DC3000Δ28 6 h4.01
S0646Rio Grande prf3 (deletion in Prf)DC3000ΔAvrPtoΔAvrPtoB 6 h5.69
S0647Rio Grande prf3 (deletion in Prf)Pseudomonas fluorescens 6 h4.4
S0648Rio Grande prf3 (deletion in Prf)Pseudomonas putida 6 h2.72
S0649Rio Grande prf3 (deletion in Prf)Agrobacterium tumefaciens 6 h6.82

Experiment: Transcriptome or gene expression of various fruit tissue in FW3.2 NILs
sample IDgenotype descriptionRPM
S0671Yellow Stuffer (cultivated allele of fw3.2)fw3.2(ys) 5 Days Post Anthesis Pericarp1332.26
S0672Yellow Stuffer (wild allele of fw3.2)fw3.2(wt) 5 Days Post Anthesis Pericarp1204.34
S0673Yellow Stuffer (cultivated allele of fw3.2)fw3.2(ys) 7 Days Post Anthesis Pericarp987.11
S0674Yellow Stuffer (wild allele of fw3.2)fw3.2(wt) 7 Days Post Anthesis Pericarp953.07
S0675Yellow Stuffer (cultivated allele of fw3.2)fw3.2(ys) 10 Days Post Anthesis Pericarp809.26
S0676Yellow Stuffer (wild allele of fw3.2)fw3.2(wt) 10 Days Post Anthesis Pericarp722.58
S0677Yellow Stuffer (cultivated allele of fw3.2)fw3.2(ys) 5 Days Post Anthesis Seed863.45
S0678Yellow Stuffer (wild allele of fw3.2)fw3.2(wt) 5 Days Post Anthesis Seed800.99
S0679Yellow Stuffer (cultivated allele of fw3.2)fw3.2(ys) 7 Days Post Anthesis Seed549.54
S0680Yellow Stuffer (wild allele of fw3.2)fw3.2(wt) 7 Days Post Anthesis Seed584.21
S0681Yellow Stuffer (cultivated allele of fw3.2)fw3.2(ys) 10 Days Post Anthesis Seed267.02
S0682Yellow Stuffer (wild allele of fw3.2)fw3.2(wt) 10 Days Post Anthesis Seed213.15
S0683Yellow Stuffer (cultivated allele of fw3.2)fw3.2(ys) young flower bud435.76
S0684Yellow Stuffer (wild allele of fw3.2)fw3.2(wt) young flower bud489

Experiment: Tissue-specific transcriptome profiling of Solanum pimpinellifolium ovaries and fruit using LCM-coupled to RNA-seq
sample IDgenotype descriptionRPM
S0685LA1589LA1589, Ovule 0 dpa (SA1_D0_OV)52.85
S0686sunsun, Ovule 0 dpa (SA2_D0_OV)51.27
S0687LA1589LA1589, Placenta 0 dpa (SA1_D0_PL)156.3
S0688sunsun, Placenta 0 dpa (SA2_D0_PL)164.31
S0689LA1589LA1589, Septum 0 dpa (SA1_D0_SE)105.08
S0690sunsun, Septum 0 dpa (SA2_D0_SE)130.32
S0691LA1589LA1589, Pericarp 0 dpa (SA1_D0_PE)229.45
S0692sunsun, Pericarp 0 dpa (SA2_D0_PE)233.55
S0693LA1589LA1589, Embryo 4 dpa Fruit (SA1_D4_EM)22.14
S0694sunsun, Embryo 4 dpa Fruit (SA2_D4_EM)20.58
S0695LA1589LA1589, Endosperm 4 dpa Fruit (SA1_D4_ENDO)42.26
S0696sunsun, Endosperm 4 dpa Fruit (SA2_D4_ENDO)12.61
S0697LA1589LA1589, Seed Coat 4 dpa Fruit (SA1_D4_SC)38.17
S0698sunsun, Seed Coat 4 dpa Fruit (SA2_D4_SC)31.2
S0699LA1589LA1589, Funiculus 4 dpa Fruit (SA1_D4_FU)117.66
S0700sunsun, Funiculus 4 dpa Fruit (SA2_D4_FU)87.45
S0701LA1589LA1589, Placenta 4 dpa Fruit (SA1_D4_PL)194.5
S0702sunsun, Placenta 4 dpa Fruit (SA2_D4_PL)120.87
S0703LA1589LA1589, Septum 4 dpa Fruit (SA1_D4_SE)295.19
S0704sunsun, Septum 4 dpa Fruit (SA2_D4_SE)140.68
S0705LA1589LA1589, Pericarp 4 dpa Fruit (SA1_D4_PE)525.82
S0706sunsun, Pericarp 4 dpa Fruit (SA2_D4_PE)221.31

Experiment: Transcriptome sequencing of leaves of resistant (RG-PtoR) and susceptible (RG-prf3 and RG-prf19) tomato plants treated with Pst DC3000
sample IDgenotype descriptionRPM
S0740Rio Grande-PtoRDC3000 4 h7.76
S0741Rio Grande-prf3DC3000 4 h10.04
S0742Rio Grande-prf19DC3000 4 h8.6
S0743Rio Grande-PtoRDC3000 6 h3.52
S0744Rio Grande-prf3DC3000 6 h29
S0745Rio Grande-prf19DC3000 6 h26.16

Experiment: Transcriptome sequencing of tomato leaves trated with diferent Pst DC3000 mutant strains
sample IDgenotype descriptionRPM
S0746Rio Grande-PtoRDC3000ΔhopQ1-1 ΔfliC 6 h5.38
S0747Rio Grande-PtoRDC3000ΔhopQ1-1 ΔavrPto ΔavrPtoB 6 h7.3
S0748Rio Grande-PtoRDC3000ΔhopQ1-1 ΔavrPto ΔavrPtoB ΔfliC 6 h13.07

Experiment: Transcriptome profiling of anthesis-stage ovaries from the fs8.1 backcrossed lines in Rio Grande background
sample IDgenotype descriptionRPM
S0749fs8.1, backcrossed line 09S204, BC4F2, Rio Grande background09S204-ee, ovary(anthesis)22.85
S0750WT, backcrossed line 09S204, BC4F2, Rio Grande background09S204-pp, ovary(anthesis)32.47
S0751fs8.1, backcrossed line 09S236, BC3F2, Rio Grande background09S236-ee, ovary(anthesis)25.7
S0752WT, backcrossed line 09S236, BC3F2, Rio Grande background09S236-pp, ovary(anthesis)32.63
S0753fs8.1, backcrossed line 09S237, BC1F4, Rio Grande background09S237-ee, ovary(anthesis)51.09
S0754WT, backcrossed line 09S237, BC1F4, Rio Grande background09S237-pp, ovary(anthesis)53.64

Experiment: Domain-wise effect of AvrPto on the tomato transcriptome 6 hours post inoculation
sample IDgenotype descriptionRPM
S0755Rio Grande-prf3D28E (pCPP45::avrPto) 6 h14.32
S0756Rio Grande-prf3D28E (pCPP45::avrPto I96A) 6 h8.45
S0757Rio Grande-prf3D28E (pCPP45::avrPto 2xA) 6 h12.46
S0758Rio Grande-prf3D28E (pCPP45::avrPto I96A + 2xA) 6 h5.52
S0759Rio Grande-prf3Mock 6 h21.63

Experiment: Transcriptome sequencing of Pti1 silenced plants after treatment of Pst DC3000ΔAvrPtoΔAvrPtoB
sample IDgenotype descriptionRPM
S0658Rio Grande prf3 (deletion in Prf)Azygous of hpPti1 DC3000ΔAvrPtoΔAvrPtoB 3 h3.65
S0659Rio Grande prf3 (deletion in Prf)hpPti1-F10 DC3000ΔAvrPtoΔAvrPtoB 3 h 4.09
S0660Rio Grande prf3 (deletion in Prf)hpPti1-F27 DC3000ΔAvrPtoΔAvrPtoB 3 h5.3
S0661Rio Grande prf3 (deletion in Prf)Azygous of hpPti1 DC3000ΔAvrPtoΔAvrPtoB 6 h14.27
S0662Rio Grande prf3 (deletion in Prf), hairpin Pti1, line F10hpPti1-F10 DC3000ΔAvrPtoΔAvrPtoB 6 h22.25
S0663Rio Grande prf3 (deletion in Prf), hairpin Pti1, line F27hpPti1-F27 ΔAvrPtoΔAvrPtoB 6 h20.74

Experiment: Gene expression in IM/FM, 2 dpi, 4 dpi and 6 dpi floral buds of wild type, lc, fas and lc/fas in the LA1589 background
sample IDgenotype descriptionRPM
S1087LA15892dpi floral buds149.91
S1088lc2dpi floral buds182.23
S1089fas2dpi floral buds151.39
S1090lc/fas2dpi floral buds147.31
S1091LA15894dpi floral buds180.37
S1092lc4dpi floral buds176.96
S1093fas4dpi floral buds151.4
S1094lc/fas4dpi floral buds144.87
S1095LA15896dpi floral buds207.23
S1096lc6dpi floral buds174.55
S1097fas6dpi floral buds154.97
S1098lc/fas6dpi floral buds150.58
S1099LA1589floral and inflorescence meristem117.49
S1100lcfloral and inflorescence meristem131.44
S1101fasfloral and inflorescence meristem101.9
S1102lc/fasfloral and inflorescence meristem100.21
S1103LA1589sympodial shoot apical meristem191.11
S1104lcsympodial shoot apical meristem146.77
S1105fassympodial shoot apical meristem150.44
S1106lc/fassympodial shoot apical meristem151.56

Experiment: RNA-Seq analysis on tomato anthesis flowers of ovate/sov1 NILs in the LA1589 background
sample IDgenotype descriptionRPM
S0764LA1589LA1589, flowers18.72
S0765ovateovate, flowers25.04
S0766sov1sov1, flowers21.26
S0767ovate/sov1ovate/sov1, flowers32.67

Experiment: Transcriptome profiling of three fruit tissues from the fw11.3 NILs in cultivated background
sample IDgenotype descriptionRPM
S0768Rio Grande (fw11.3-D)fw11.3-D Pericarp, 10 Days Post Anthesis51.9
S0769Rio Grande (fw11.3-D)fw11.3-D Septum and Placenta, 10 Days Post Anthesis37.41
S0770Rio Grande (fw11.3-D)fw11.3-D Columella, 10 Days Post Anthesis5.58
S0771Rio Grande (fw11.3-D)fw11.3-D Pericarp, 15 Days Post Anthesis18.13
S0772Rio Grande (fw11.3-D)fw11.3-D Septum and Placenta, 15 Days Post Anthesis12.74
S0773Rio Grande (fw11.3-D)fw11.3-D Columella, 15 Days Post Anthesis4.59
S0774Rio Grande (fw11.3-D)fw11.3-D Pericarp, 25 Days Post Anthesis6.04
S0775Rio Grande (fw11.3-D)fw11.3-D Septum and Placenta, 25 Days Post Anthesis5.49
S0776Rio Grande (fw11.3-D)fw11.3-D Columella, 25 Days Post Anthesis4.29
S0777Rio Grande (fw11.3-D)fw11.3-D Pericarp, 33 Days Post Anthesis4.12
S0778Rio Grande (fw11.3-D)fw11.3-D Septum and Placenta, 33 Days Post Anthesis4.84
S0779Rio Grande (fw11.3-D)fw11.3-D Columella, 33 Days Post Anthesis5.17
S0780Rio Grande (fw11.3-D)fw11.3-D Pericarp, 4 Days Post Anthesis159.39
S0781Rio Grande (fw11.3-D)fw11.3-D Septum, Placenta and Columella, 4 Days Post Anthesis87.71
S0782Rio Grande (fw11.3-D)fw11.3-D Pericarp, 7 Days Post Anthesis80.02
S0783Rio Grande (fw11.3-D)fw11.3-D Septum and Placenta, 7 Days Post Anthesis94.01
S0784Rio Grande (fw11.3-D)fw11.3-D Columella, 7 Days Post Anthesis12.62
S0785Rio Grande (fw11.3-D)fw11.3-D Pericarp, Turning3.78
S0786Rio Grande (fw11.3-D)fw11.3-D Septum and Placenta, Turning3.01
S0787Rio Grande (fw11.3-D)fw11.3-D Columella, Turning4.29
S0788Rio Grande (fw11.3-WT)fw11.3-WT Pericarp, 10 Days Post Anthesis52.9
S0789Rio Grande (fw11.3-WT)fw11.3-WT Septum and Placenta, 10 Days Post Anthesis40.74
S0790Rio Grande (fw11.3-WT)fw11.3-WT Columella, 10 Days Post Anthesis6.84
S0791Rio Grande (fw11.3-WT)fw11.3-WT Pericarp, 15 Days Post Anthesis9.03
S0792Rio Grande (fw11.3-WT)fw11.3-WT Septum and Placenta, 15 Days Post Anthesis10.9
S0793Rio Grande (fw11.3-WT)fw11.3-WT Columella, 15 Days Post Anthesis4.31
S0794Rio Grande (fw11.3-WT)fw11.3-WT Pericarp, 25 Days Post Anthesis5.91
S0795Rio Grande (fw11.3-WT)fw11.3-WT Septum and Placenta, 25 Days Post Anthesis5.2
S0796Rio Grande (fw11.3-WT)fw11.3-WT Columella, 25 Days Post Anthesis4.5
S0797Rio Grande (fw11.3-WT)fw11.3-WT Pericarp, 33 Days Post Anthesis4.17
S0798Rio Grande (fw11.3-WT)fw11.3-WT Septum and Placenta, 33 Days Post Anthesis3.23
S0799Rio Grande (fw11.3-WT)fw11.3-WT Columella, 33 Days Post Anthesis3.92
S0800Rio Grande (fw11.3-WT)fw11.3-WT Pericarp, 4 Days Post Anthesis141.41
S0801Rio Grande (fw11.3-WT)fw11.3-WT Septum, Placenta and Columella, 4 Days Post Anthesis85.82
S0802Rio Grande (fw11.3-WT)fw11.3-WT Pericarp, 7 Days Post Anthesis78.59
S0803Rio Grande (fw11.3-WT)fw11.3-WT Septum and Placenta, 7 Days Post Anthesis90.52
S0804Rio Grande (fw11.3-WT)fw11.3-WT Columella, 7 Days Post Anthesis15.67
S0805Rio Grande (fw11.3-WT)fw11.3-WT Pericarp, Turning2.59
S0806Rio Grande (fw11.3-WT)fw11.3-WT Septum and Placenta, Turning3.91
S0807Rio Grande (fw11.3-WT)fw11.3-WT Columella, Turning4.44

Experiment: Transcriptome profiling of three fruit tissues from the sun NILs in cultivated background
sample IDgenotype descriptionRPM
S0808Sun1642 (sun-WT)SA3 Pericarp and exocarp, 4 Days Post Anthesis402.13
S0809Sun1642 (sun-WT)SA3 Septum and seeds, 4 Days Post Anthesis293.63
S0810Sun1642 (sun-WT)SA3 Pericarp, 7 Days Post Anthesis493.01
S0811Sun1642 (sun-WT)SA3 Septum, 7 Days Post Anthesis231.35
S0812Sun1642 (sun-WT)SA3 Seeds, 7 Days Post Anthesis126.33
S0813Sun1642 (sun-WT)SA3 Pericarp, 10 Days Post Anthesis90.01
S0814Sun1642 (sun-WT)SA3 Septum, 10 Days Post Anthesis48.25
S0815Sun1642 (sun-WT)SA3 Seeds, 10 Days Post Anthesis88.72
S0816Sun1642 (sun-D)SA4 Pericarp and exocarp, 4 Days Post Anthesis375.02
S0817Sun1642 (sun-D)SA4 Septum and seeds, 4 Days Post Anthesis163.09
S0818Sun1642 (sun-D)SA4 Pericarp, 7 Days Post Anthesis271.53
S0819Sun1642 (sun-D)SA4 Septum, 7 Days Post Anthesis586.37
S0820Sun1642 (sun-D)SA4 Seeds, 7 Days Post Anthesis300.67
S0821Sun1642 (sun-D)SA4 Pericarp, 10 Days Post Anthesis222.64
S0822Sun1642 (sun-D)SA4 Septum, 10 Days Post Anthesis60.21
S0823Sun1642 (sun-D)SA4 Seeds, 10 Days Post Anthesis239.81

Experiment: Transcriptome profiling of ripe fruits of S. lycopersicoides ILs
sample IDgenotype descriptionRPM
S0824VF36fruit, red ripe, VF361.42
S0825LA3882fruit, red ripe, S. lycopersicoides IL LA38823.08
S0826LA3886fruit, red ripe, S. lycopersicoides IL LA38861.24
S0827LA3892fruit, red ripe, S. lycopersicoides IL LA38921.43
S0828LA4230fruit, red ripe, S. lycopersicoides IL LA42300.85
S0829LA4231fruit, red ripe, S. lycopersicoides IL LA42311
S0830LA4232fruit, red ripe, S. lycopersicoides IL LA42322.41
S0831LA4233fruit, red ripe, S. lycopersicoides IL LA42331.22
S0832LA4234Afruit, red ripe, S. lycopersicoides IL LA4234A1.65
S0833LA4234Bfruit, red ripe, S. lycopersicoides IL LA4234B1.44
S0834LA4235fruit, red ripe, S. lycopersicoides IL LA42351.5
S0835LA4236Afruit, red ripe, S. lycopersicoides IL LA4236A1.89
S0836LA4237fruit, red ripe, S. lycopersicoides IL LA42371.58
S0837LA4238fruit, red ripe, S. lycopersicoides IL LA42381.61
S0838LA4239fruit, red ripe, S. lycopersicoides IL LA42391.47
S0839LA4241Afruit, red ripe, S. lycopersicoides IL LA4241A2.28
S0840LA4241Bfruit, red ripe, S. lycopersicoides IL LA4241B1.11
S0841LA4242Afruit, red ripe, S. lycopersicoides IL LA4242A1.15
S0842LA4242Bfruit, red ripe, S. lycopersicoides IL LA4242B1.64
S0843LA4242Cfruit, red ripe, S. lycopersicoides IL LA4242C0.75
S0844LA4243fruit, red ripe, S. lycopersicoides IL LA42431.54
S0845LA4244fruit, red ripe, S. lycopersicoides IL LA42441.91
S0846LA4245fruit, red ripe, S. lycopersicoides IL LA42450.99
S0847LA4247fruit, red ripe, S. lycopersicoides IL LA42471.65
S0848LA4248fruit, red ripe, S. lycopersicoides IL LA42481.28
S0849LA4249Afruit, red ripe, S. lycopersicoides IL LA4249A1.84
S0850LA4249Bfruit, red ripe, S. lycopersicoides IL LA4249B1.29
S0851LA4250Afruit, red ripe, S. lycopersicoides IL LA4250A1.1
S0852LA4250Bfruit, red ripe, S. lycopersicoides IL LA4250B1.16
S0853LA4250Cfruit, red ripe, S. lycopersicoides IL LA4250C2.22
S0854LA4251fruit, red ripe, S. lycopersicoides IL LA42512.48
S0855LA4252Afruit, red ripe, S. lycopersicoides IL LA4252A1.33
S0856LA4252Bfruit, red ripe, S. lycopersicoides IL LA4252B1.12
S0857LA4252Cfruit, red ripe, S. lycopersicoides IL LA4252C1.24
S0858LA4252Efruit, red ripe, S. lycopersicoides IL LA4252E1.24
S0859LA4252Ffruit, red ripe, S. lycopersicoides IL LA4252F1.03
S0860LA4253fruit, red ripe, S. lycopersicoides IL LA42531.16
S0861LA4254fruit, red ripe, S. lycopersicoides IL LA42541.12
S0862LA4255fruit, red ripe, S. lycopersicoides IL LA42551.43
S0863LA4256fruit, red ripe, S. lycopersicoides IL LA42561.39
S0864LA4257fruit, red ripe, S. lycopersicoides IL LA42571.64
S0865LA4258fruit, red ripe, S. lycopersicoides IL LA42582.02
S0866LA4260fruit, red ripe, S. lycopersicoides IL LA42602.45
S0867LA4262Afruit, red ripe, S. lycopersicoides IL LA4262A1.4
S0868LA4262Bfruit, red ripe, S. lycopersicoides IL LA4262B0.79
S0869LA4263Afruit, red ripe, S. lycopersicoides IL LA4263A1.61
S0870LA4263Bfruit, red ripe, S. lycopersicoides IL LA4263B1.68
S0871LA4263Cfruit, red ripe, S. lycopersicoides IL LA4263C2.05
S0872LA4263Dfruit, red ripe, S. lycopersicoides IL LA4263D1.07
S0873LA4264Afruit, red ripe, S. lycopersicoides IL LA4264A0.72
S0874LA4264Bfruit, red ripe, S. lycopersicoides IL LA4264B1.3
S0875LA4266Afruit, red ripe, S. lycopersicoides IL LA4266A1.32
S0876LA4266Bfruit, red ripe, S. lycopersicoides IL LA4266B1.82
S0877LA4268fruit, red ripe, S. lycopersicoides IL LA42680.9
S0878LA4269fruit, red ripe, S. lycopersicoides IL LA42691.17
S0879LA4270Afruit, red ripe, S. lycopersicoides IL LA4270A1.39
S0880LA4270Bfruit, red ripe, S. lycopersicoides IL LA4270B13.68
S0881LA4272fruit, red ripe, S. lycopersicoides IL LA42721.46
S0882LA4273fruit, red ripe, S. lycopersicoides IL LA42731.38
S0883LA4274fruit, red ripe, S. lycopersicoides IL LA42740.91
S0884LA4275fruit, red ripe, S. lycopersicoides IL LA42751.31
S0885LA4276Afruit, red ripe, S. lycopersicoides IL LA4276A1.03
S0886LA4276Bfruit, red ripe, S. lycopersicoides IL LA4276B2.41
S0887LA4276Cfruit, red ripe, S. lycopersicoides IL LA4276C1.86
S0888LA4276Dfruit, red ripe, S. lycopersicoides IL LA4276D2.52
S0889LA4277fruit, red ripe, S. lycopersicoides IL LA42771.05
S0890LA4277Bfruit, red ripe, S. lycopersicoides IL LA4277B2.84
S0891LA4277Cfruit, red ripe, S. lycopersicoides IL LA4277C2.11
S0892LA4278Afruit, red ripe, S. lycopersicoides IL LA4278A2.38
S0893LA4278Bfruit, red ripe, S. lycopersicoides IL LA4278B1.34
S0894LA4279fruit, red ripe, S. lycopersicoides IL LA42791.86
S0895LA4280fruit, red ripe, S. lycopersicoides IL LA42801.44
S0896LA4281Afruit, red ripe, S. lycopersicoides IL LA4281A1.3
S0897LA4281Bfruit, red ripe, S. lycopersicoides IL LA4281B1.3
S0898LA4281Cfruit, red ripe, S. lycopersicoides IL LA4281C1.97
S0899LA4281Dfruit, red ripe, S. lycopersicoides IL LA4281D1.16
S0900LA4281Efruit, red ripe, S. lycopersicoides IL LA4281E1.26
S0901LA4282Afruit, red ripe, S. lycopersicoides IL LA4282A1.02
S0902LA4282Bfruit, red ripe, S. lycopersicoides IL LA4282B1.21
S0903LA4282Cfruit, red ripe, S. lycopersicoides IL LA4282C0.84
S0904LA4284fruit, red ripe, S. lycopersicoides IL LA42841.42
S0905LA4294Afruit, red ripe, S. lycopersicoides IL LA4294A1.65
S0906LA4294Bfruit, red ripe, S. lycopersicoides IL LA4294B1.9
S0907LA4295fruit, red ripe, S. lycopersicoides IL LA42951.81
S0908LA4296fruit, red ripe, S. lycopersicoides IL LA42961.66
S0909LA4297fruit, red ripe, S. lycopersicoides IL LA42970.62
S0910LA4298fruit, red ripe, S. lycopersicoides IL LA42981.71
S0911LA4299fruit, red ripe, S. lycopersicoides IL LA42991.02
S0912LA4300Afruit, red ripe, S. lycopersicoides IL LA4300A1.71
S0913LA4300Bfruit, red ripe, S. lycopersicoides IL LA4300B0.48
S0914LA4301Afruit, red ripe, S. lycopersicoides IL LA4301A1.47
S0915LA4303fruit, red ripe, S. lycopersicoides IL LA43030.89
S0916LA4305fruit, red ripe, S. lycopersicoides IL LA43051.06
S0917LA4306Afruit, red ripe, S. lycopersicoides IL LA4306A0.75
S0918LA4306Bfruit, red ripe, S. lycopersicoides IL LA4306B0.48
S0919LA4307fruit, red ripe, S. lycopersicoides IL LA43071.33
S0920LA4308fruit, red ripe, S. lycopersicoides IL LA43081.32
S0921LA4308Afruit, red ripe, S. lycopersicoides IL LA4308A1.48
S0922LA4309fruit, red ripe, S. lycopersicoides IL LA43091.43
S0923LA4310fruit, red ripe, S. lycopersicoides IL LA43101.06
S0924LA4311fruit, red ripe, S. lycopersicoides IL LA43111.24
S0925LA4312Afruit, red ripe, S. lycopersicoides IL LA4312A2.27
S0926LA4312Bfruit, red ripe, S. lycopersicoides IL LA4312B1.1
S0927LA4313Afruit, red ripe, S. lycopersicoides IL LA4313A0.67
S0928LA4313Bfruit, red ripe, S. lycopersicoides IL LA4313B0.86

Experiment: Transcriptome profiling of ripe fruits of S. pimpinellifolium RILs
sample IDgenotype descriptionRPM
S0953LA2093fruit, red ripe, S. pimpinellifolium LA20931.45
S0954NCEBR1fruit, red ripe, S. lycopersicum NCEBR12.67
S0955RIL-1fruit, red ripe, S. pimpinellifolium RIL-14
S0956RIL-3fruit, red ripe, S. pimpinellifolium RIL-32.93
S0957RIL-4fruit, red ripe, S. pimpinellifolium RIL-42.26
S0958RIL-5fruit, red ripe, S. pimpinellifolium RIL-51.46
S0959RIL-6fruit, red ripe, S. pimpinellifolium RIL-62.44
S0960RIL-7fruit, red ripe, S. pimpinellifolium RIL-73.24
S0961RIL-11fruit, red ripe, S. pimpinellifolium RIL-113.12
S0962RIL-12fruit, red ripe, S. pimpinellifolium RIL-122.95
S0963RIL-13fruit, red ripe, S. pimpinellifolium RIL-132.65
S0964RIL-14fruit, red ripe, S. pimpinellifolium RIL-143.5
S0965RIL-16fruit, red ripe, S. pimpinellifolium RIL-163.66
S0966RIL-18fruit, red ripe, S. pimpinellifolium RIL-183.44
S0967RIL-19fruit, red ripe, S. pimpinellifolium RIL-192.7
S0968RIL-20fruit, red ripe, S. pimpinellifolium RIL-201.81
S0969RIL-21fruit, red ripe, S. pimpinellifolium RIL-211.35
S0970RIL-22fruit, red ripe, S. pimpinellifolium RIL-222.32
S0971RIL-23fruit, red ripe, S. pimpinellifolium RIL-232.14
S0972RIL-24fruit, red ripe, S. pimpinellifolium RIL-242.77
S0973RIL-25fruit, red ripe, S. pimpinellifolium RIL-251.54
S0974RIL-26fruit, red ripe, S. pimpinellifolium RIL-264.61
S0975RIL-27fruit, red ripe, S. pimpinellifolium RIL-272.55
S0976RIL-28fruit, red ripe, S. pimpinellifolium RIL-281.58
S0977RIL-30fruit, red ripe, S. pimpinellifolium RIL-302.45
S0978RIL-31fruit, red ripe, S. pimpinellifolium RIL-312.21
S0979RIL-32fruit, red ripe, S. pimpinellifolium RIL-321.98
S0980RIL-33fruit, red ripe, S. pimpinellifolium RIL-334.75
S0981RIL-34fruit, red ripe, S. pimpinellifolium RIL-342.79
S0982RIL-35fruit, red ripe, S. pimpinellifolium RIL-352.47
S0983RIL-37fruit, red ripe, S. pimpinellifolium RIL-371.52
S0984RIL-38fruit, red ripe, S. pimpinellifolium RIL-382.94
S0985RIL-39fruit, red ripe, S. pimpinellifolium RIL-392.93
S0986RIL-41fruit, red ripe, S. pimpinellifolium RIL-412.65
S0987RIL-43fruit, red ripe, S. pimpinellifolium RIL-434.12
S0988RIL-45fruit, red ripe, S. pimpinellifolium RIL-453.7
S0989RIL-47fruit, red ripe, S. pimpinellifolium RIL-472.33
S0990RIL-48fruit, red ripe, S. pimpinellifolium RIL-483.41
S0991RIL-49fruit, red ripe, S. pimpinellifolium RIL-492.99
S0992RIL-50fruit, red ripe, S. pimpinellifolium RIL-502.64
S0993RIL-52fruit, red ripe, S. pimpinellifolium RIL-522.61
S0994RIL-53fruit, red ripe, S. pimpinellifolium RIL-533.07
S0995RIL-54fruit, red ripe, S. pimpinellifolium RIL-543.74
S0996RIL-55fruit, red ripe, S. pimpinellifolium RIL-553.12
S0997RIL-56fruit, red ripe, S. pimpinellifolium RIL-562.59
S0998RIL-57fruit, red ripe, S. pimpinellifolium RIL-573.49
S0999RIL-58fruit, red ripe, S. pimpinellifolium RIL-582.55
S1000RIL-62fruit, red ripe, S. pimpinellifolium RIL-622.47
S1001RIL-63fruit, red ripe, S. pimpinellifolium RIL-632.67
S1002RIL-65fruit, red ripe, S. pimpinellifolium RIL-652.56
S1003RIL-66fruit, red ripe, S. pimpinellifolium RIL-662.15
S1004RIL-67fruit, red ripe, S. pimpinellifolium RIL-672.19
S1005RIL-68fruit, red ripe, S. pimpinellifolium RIL-682.58
S1006RIL-69fruit, red ripe, S. pimpinellifolium RIL-692.49
S1007RIL-71fruit, red ripe, S. pimpinellifolium RIL-712.26
S1008RIL-72fruit, red ripe, S. pimpinellifolium RIL-722.15
S1009RIL-73fruit, red ripe, S. pimpinellifolium RIL-732.53
S1010RIL-75fruit, red ripe, S. pimpinellifolium RIL-755.82
S1011RIL-76fruit, red ripe, S. pimpinellifolium RIL-761.59
S1012RIL-77fruit, red ripe, S. pimpinellifolium RIL-772.42
S1013RIL-78fruit, red ripe, S. pimpinellifolium RIL-781.74
S1014RIL-79fruit, red ripe, S. pimpinellifolium RIL-791.41
S1015RIL-80fruit, red ripe, S. pimpinellifolium RIL-803.77
S1016RIL-81fruit, red ripe, S. pimpinellifolium RIL-811.92
S1017RIL-84fruit, red ripe, S. pimpinellifolium RIL-843.5
S1018RIL-85fruit, red ripe, S. pimpinellifolium RIL-852.52
S1019RIL-88fruit, red ripe, S. pimpinellifolium RIL-883.12
S1020RIL-90fruit, red ripe, S. pimpinellifolium RIL-902.26
S1021RIL-91fruit, red ripe, S. pimpinellifolium RIL-912.45
S1022RIL-95fruit, red ripe, S. pimpinellifolium RIL-951.41
S1023RIL-96fruit, red ripe, S. pimpinellifolium RIL-963.9
S1024RIL-97fruit, red ripe, S. pimpinellifolium RIL-972.76
S1025RIL-98fruit, red ripe, S. pimpinellifolium RIL-981.53
S1026RIL-99fruit, red ripe, S. pimpinellifolium RIL-992.6
S1027RIL-100fruit, red ripe, S. pimpinellifolium RIL-1002.69
S1028RIL-101fruit, red ripe, S. pimpinellifolium RIL-1014.22
S1029RIL-102fruit, red ripe, S. pimpinellifolium RIL-1021.68
S1030RIL-103fruit, red ripe, S. pimpinellifolium RIL-1031.56
S1031RIL-105fruit, red ripe, S. pimpinellifolium RIL-1054.55
S1032RIL-107fruit, red ripe, S. pimpinellifolium RIL-1072.13
S1033RIL-108fruit, red ripe, S. pimpinellifolium RIL-1084.29
S1034RIL-109fruit, red ripe, S. pimpinellifolium RIL-1091.82
S1035RIL-111fruit, red ripe, S. pimpinellifolium RIL-1113.58
S1036RIL-112fruit, red ripe, S. pimpinellifolium RIL-1122.28
S1037RIL-113fruit, red ripe, S. pimpinellifolium RIL-1132.45
S1038RIL-114fruit, red ripe, S. pimpinellifolium RIL-1141.44
S1039RIL-115fruit, red ripe, S. pimpinellifolium RIL-1152.13
S1040RIL-116fruit, red ripe, S. pimpinellifolium RIL-1161.79
S1041RIL-117fruit, red ripe, S. pimpinellifolium RIL-1172.28
S1042RIL-118fruit, red ripe, S. pimpinellifolium RIL-1181.75
S1043RIL-120fruit, red ripe, S. pimpinellifolium RIL-1201.87
S1044RIL-121fruit, red ripe, S. pimpinellifolium RIL-1212.85
S1045RIL-122fruit, red ripe, S. pimpinellifolium RIL-1222.69
S1046RIL-123fruit, red ripe, S. pimpinellifolium RIL-1231.64
S1047RIL-124fruit, red ripe, S. pimpinellifolium RIL-1242.44
S1048RIL-125fruit, red ripe, S. pimpinellifolium RIL-1253.16
S1049RIL-126fruit, red ripe, S. pimpinellifolium RIL-1261.22
S1050RIL-128fruit, red ripe, S. pimpinellifolium RIL-1282.37
S1051RIL-129fruit, red ripe, S. pimpinellifolium RIL-1295.7
S1052RIL-130fruit, red ripe, S. pimpinellifolium RIL-1301.13
S1053RIL-131fruit, red ripe, S. pimpinellifolium RIL-1312.26
S1054RIL-132fruit, red ripe, S. pimpinellifolium RIL-1323.57
S1055RIL-133fruit, red ripe, S. pimpinellifolium RIL-1334.75
S1056RIL-134fruit, red ripe, S. pimpinellifolium RIL-1340.97
S1057RIL-135fruit, red ripe, S. pimpinellifolium RIL-1352.12
S1058RIL-137fruit, red ripe, S. pimpinellifolium RIL-1374.8
S1059RIL-139fruit, red ripe, S. pimpinellifolium RIL-1394.78
S1060RIL-140fruit, red ripe, S. pimpinellifolium RIL-1403.07
S1061RIL-142fruit, red ripe, S. pimpinellifolium RIL-1421.85
S1062RIL-143fruit, red ripe, S. pimpinellifolium RIL-1432.17
S1063RIL-144fruit, red ripe, S. pimpinellifolium RIL-1442.97
S1064RIL-145fruit, red ripe, S. pimpinellifolium RIL-1453.27
S1065RIL-146fruit, red ripe, S. pimpinellifolium RIL-1461.87
S1066RIL-147fruit, red ripe, S. pimpinellifolium RIL-1471.77
S1067RIL-148fruit, red ripe, S. pimpinellifolium RIL-1481.74
S1068RIL-149fruit, red ripe, S. pimpinellifolium RIL-1492.88
S1069RIL-150fruit, red ripe, S. pimpinellifolium RIL-1501.78
S1070RIL-151fruit, red ripe, S. pimpinellifolium RIL-1512.19
S1071RIL-152fruit, red ripe, S. pimpinellifolium RIL-1524.09
S1072RIL-153fruit, red ripe, S. pimpinellifolium RIL-1532.16
S1073RIL-154fruit, red ripe, S. pimpinellifolium RIL-1541.76
S1074RIL-155fruit, red ripe, S. pimpinellifolium RIL-1552.8
S1075RIL-156fruit, red ripe, S. pimpinellifolium RIL-1563
S1076RIL-159fruit, red ripe, S. pimpinellifolium RIL-1592.49
S1077RIL-160fruit, red ripe, S. pimpinellifolium RIL-1602.97
S1078RIL-161fruit, red ripe, S. pimpinellifolium RIL-1612.67
S1079RIL-162fruit, red ripe, S. pimpinellifolium RIL-1624.57
S1080RIL-164fruit, red ripe, S. pimpinellifolium RIL-1641.88
S1081RIL-165fruit, red ripe, S. pimpinellifolium RIL-1652.45
S1082RIL-167fruit, red ripe, S. pimpinellifolium RIL-1672.58
S1083RIL-168fruit, red ripe, S. pimpinellifolium RIL-1682.87
S1084RIL-169fruit, red ripe, S. pimpinellifolium RIL-1692.85
S1085RIL-171fruit, red ripe, S. pimpinellifolium RIL-1711.65
S1086RIL-172fruit, red ripe, S. pimpinellifolium RIL-1725.42

Experiment: Transcriptome profiling of fruit of cultivated and wild tomatoes
sample IDgenotype descriptionRPM
S1107LA0816 (VF-145)LA0816 immature green fruit10.73
S1108LA0816 (VF-145)LA0816 mature green fruit4.48
S1109LA0816 (VF-145)LA0816 breaker fruit2.08
S1110LA0816 (VF-145)LA0816 ripe fruit1.46
S1111LA1563LA1563 immature green fruit8.94
S1112LA1563LA1563 mature green fruit3.99
S1113LA1563LA1563 breaker fruit2.77
S1114LA1563LA1563 ripe fruit1.62
S1115BD-MPBD-MP immature green fruit6.61
S1116BD-MPBD-MP mature green fruit5.35
S1117BD-MPBD-MP breaker fruit2.55
S1118BD-MPBD-MP ripe fruit2.06
S1119BD-MTBD-MT immature green fruit32.89
S1120BD-MTBD-MT mature green fruit9.65
S1121BD-MTBD-MT breaker fruit3.55
S1122BD-MTBD-MT ripe fruit1.62
S1123LA1306LA1306 immature green fruit277.21
S1124LA1306LA1306 mature green fruit97.4
S1125LA1306LA1306 breaker fruit5.03
S1126LA1306LA1306 ripe fruit4.51
S1127LA1412LA1412 immature green fruit197.61
S1128LA1412LA1412 mature green fruit34.63
S1129LA1412LA1412 breaker fruit27.05
S1130LA1412LA1412 ripe fruit1.69
S1131LA1586LA1586 immature green fruit97.83
S1132LA1586LA1586 mature green fruit5.55
S1133LA1586LA1586 breaker fruit2.67
S1134LA1586LA1586 ripe fruit4.42
S1135LA1589LA1589 immature green fruit57.48
S1136LA1589LA1589 mature green fruit4.52
S1137LA1589LA1589 breaker fruit6.19
S1138LA1589LA1589 ripe fruit1.9
S1139LA1028LA1028 immature green fruit5.13
S1141LA1028LA1028 breaker fruit0.42
S1142LA1028LA1028 ripe fruit1.33
S1143LA1318LA1318 immature green fruit50.08
S1144LA1318LA1318 mature green fruit6.7
S1145LA1318LA1318 breaker fruit0.79
S1146LA1318LA1318 ripe fruit3.45
S1147BD-732BD-732 immature green fruit174.47
S1148BD-732BD-732 mature green fruit3.31
S1149BD-732BD-732 breaker fruit1.11
S1150BD-732BD-732 ripe fruit4.33
S1151LA0407LA0407 immature green fruit42.38
S1152LA0407LA0407 mature green fruit5.04
S1153LA0407LA0407 breaker fruit7.22
S1154LA0407LA0407 ripe fruit7.01
S1155LA1777LA1777 immature green fruit48.81
S1156LA1777LA1777 mature green fruit3.81
S1157LA1777LA1777 breaker fruit2.04
S1158LA1777LA1777 ripe fruit4.79
S1159LA0716LA0716 immature green fruit151.86
S1160LA0716LA0716 mature green fruit54.1
S1161LA0716LA0716 breaker fruit3.99
S1162LA0716LA0716 ripe fruit1.2
S1163PI126431PI126431 immature green fruit6.99
S1164PI126431PI126431 mature green fruit0.85
S1165PI126431PI126431 breaker fruit1.38
S1166PI126431PI126431 ripe fruit1.87
S1167PI126926PI126926 immature green fruit10.68
S1168PI126926PI126926 mature green fruit11.79
S1169PI126926PI126926 breaker fruit1.58
S1170PI126926PI126926 ripe fruit2.36
S1171LA1584LA1584 ripe fruit2.54
S1172LA2173LA2173 ripe fruit1.8
S1173LA1301LA1301 ripe fruit4.5
S1174LA1335LA1335 ripe fruit3.91
S1175LA1371LA1371 ripe fruit2.92
S1176LA1521LA1521 ripe fruit2.46
S1177LA1659LA1659 ripe fruit2.97
S1178LA0722LA0722 ripe fruit4.51
S1179LA1547LA1547 ripe fruit6.38
S1180LA3123LA3123 ripe fruit1.7
S1181LA2096LA2096 ripe fruit1.65
S1182LA1246LA1246 ripe fruit1.83
S1183LA1259LA1259 ripe fruit2.05
S1184LA2093LA2093 ripe fruit2.92
S1185LA0418LA0418 ripe fruit2.98
S1186LA2850LA2850 ripe fruit4.17
S1187LA1043LA1043 ripe fruit5.34
S1188LA0438LA0438 ripe fruit3
S1189LA0532LA0532 ripe fruit2.57
S1190LA1044LA1044 ripe fruit3.56
S1191LA1452LA1452 ripe fruit2.65
S1192LA0528LA0528 ripe fruit1.95
S1193LA0530LA0530 ripe fruit3.58
S1194LA0480ALA0480A ripe fruit2.59
S1195LA0521LA0521 ripe fruit2.38
S1196LA0422LA0422 ripe fruit4.37
S1197LA0529LA0529 ripe fruit3.26
S1198LA1039LA1039 ripe fruit2.83
S1199LA1042LA1042 ripe fruit4.22
S1200LA1407LA1407 ripe fruit1.89
S1201LA1035LA1035 ripe fruit2.64