Transcriptome sequencing of tomato leaves treated with different bacteria and PAMPs

Samples

IDorganismgenotypedescription
S0620tomatoRio Grande prf3 (deletion in Prf)mock PAMPs 30 min
S0621tomatoRio Grande prf3 (deletion in Prf)cold shock protein 22 (csp22) 30 min
S0622tomatoRio Grande prf3 (deletion in Prf)flagellin 22 (flg22) 30 min
S0623tomatoRio Grande prf3 (deletion in Prf)flagellin II-28 (flgII-28) 30 min
S0624tomatoRio Grande prf3 (deletion in Prf)Lipopolysaccharides (LPS) 30 min
S0625tomatoRio Grande prf3 (deletion in Prf)Peptidoglycan (PGN) 30 min
S0626tomatoRio Grande prf3 (deletion in Prf)mock PAMPs 6h
S0627tomatoRio Grande prf3 (deletion in Prf)cold shock protein 22 (csp22) 6 h
S0628tomatoRio Grande prf3 (deletion in Prf)flagellin 22 (flg22) 6h
S0629tomatoRio Grande prf3 (deletion in Prf)flagellin II-28 (flgII-28) 6h
S0630tomatoRio Grande prf3 (deletion in Prf)Lipopolysaccharides (LPS) 6 h
S0631tomatoRio Grande prf3 (deletion in Prf)Peptidoglycan (PGN) 6h
S0632tomatoRio Grande prf3 (deletion in Prf)mock bacteria 30 min
S0633tomatoRio Grande prf3 (deletion in Prf)DC3000 30 min
S0634tomatoRio Grande prf3 (deletion in Prf)DC3000ΔhrcQ-U 30 min
S0635tomatoRio Grande prf3 (deletion in Prf)DC3000ΔhrcQ-UΔfliC 30 min
S0636tomatoRio Grande prf3 (deletion in Prf)DC3000Δ28 30 min
S0637tomatoRio Grande prf3 (deletion in Prf)DC3000ΔAvrPtoΔAvrPtoB 30 min
S0638tomatoRio Grande prf3 (deletion in Prf)Pseudomonas fluorescens 30 min
S0639tomatoRio Grande prf3 (deletion in Prf)Pseudomonas putida 30 min
S0640tomatoRio Grande prf3 (deletion in Prf)Agrobacterium tumefaciens 30 min
S0641tomatoRio Grande prf3 (deletion in Prf)mock bacteria 6 h
S0642tomatoRio Grande prf3 (deletion in Prf)DC3000 6 h
S0643tomatoRio Grande prf3 (deletion in Prf)DC3000ΔhrcQ-U 6 h
S0644tomatoRio Grande prf3 (deletion in Prf)DC3000ΔhrcQ-UΔfliC 6 h
S0645tomatoRio Grande prf3 (deletion in Prf)DC3000Δ28 6 h
S0646tomatoRio Grande prf3 (deletion in Prf)DC3000ΔAvrPtoΔAvrPtoB 6 h
S0647tomatoRio Grande prf3 (deletion in Prf)Pseudomonas fluorescens 6 h
S0648tomatoRio Grande prf3 (deletion in Prf)Pseudomonas putida 6 h
S0649tomatoRio Grande prf3 (deletion in Prf)Agrobacterium tumefaciens 6 h