Tomato miRNA M00091
| sequence | Length | miRNA family | sRNA ID | target |
|---|
| GAGGUGCUCACUCAGCUAAUA | 21 | NA |
S16533448
| NA |
Digital expression
| Sample | No. raw reads | RPM |
|---|
| ID | Organism | Cultivar | Tissue |
|---|
| S0739 | Solanum lycopersicum | Ailsa Craig | fruit, red ripe (52 days after anthesis) | 17 | 1.66 | | S0738 | Solanum lycopersicum | Ailsa Craig | fruit, breaker (42 days after anthesis) | 148 | 19.62 | | S0737 | Solanum lycopersicum | Ailsa Craig | fruit, mature green (39 days after anthesis) | 1172 | 136.92 | | S0736 | Solanum lycopersicum | Ailsa Craig | fruit, immature (17 days after anthesis) | 5 | 1.08 | | S0735 | Solanum lycopersicum | Sunny | leaf , TSWV-infected | 109 | 8.04 | | S0373 | Solanum lycopersicum | Heinz 1706 | fruit | 1 | 0.3 | | S0371 | Solanum lycopersicum | Heinz 1706 | leaf | 1 | 0.3 |
Hits on known miRNAs
| No hits on known miRNAs were found |
Precursor of miRNA M00091
| genome hit of precursor | precursor |
|---|
| sequence ID | start | end | strand | sequence |
folding
energy | miRNA* | structure |
|---|
| SL2.40ch12 | 1979509 | 1979404 | - |
GAGGUGCUCACUCAGCUAAU
AGUUAUUGUUUAAGAAACUC
AAUAAUAUUGGCAGCAAGGA
GAAUGGUGACUUUCAGGAUG
AUAACUAUUGGCUGAGUGAG
CAUCAC | -49.70 | miRNA* |
structure |
|
