Tomato miRNA M00095

sequenceLengthmiRNA familysRNA IDtarget
UGGAAGAGGUGAUUGGAGAAA21NA S23588766 click here

Digital expression

SampleNo. raw readsRPM
IDOrganismCultivarTissue
S0735Solanum lycopersicumSunnyleaf , TSWV-infected644.72
S0716Solanum lycopersicumMicroTom fruit , 7 days post breaker512214.1
S0715Solanum lycopersicumMicroTom fruit , 5 days post breaker3535.79
S0714Solanum lycopersicumMicroTom fruit , 3 days post breaker469118.05
S0713Solanum lycopersicumMicroTom fruit , breaker stage13437.98
S0712Solanum lycopersicumMicroTom fruit , mature green12832.75
S0710Solanum lycopersicumMicroTom fruit , 5mm to 7mm in diameter10.83
S0708Solanum lycopersicumMicroTom flower, open41.23
S0373Solanum lycopersicumHeinz 1706fruit92.69
S0372Solanum lycopersicumHeinz 1706flower41.21
S0371Solanum lycopersicumHeinz 1706leaf133.92

Hits on known miRNAs

No hits on known miRNAs were found

Precursor of miRNA M00095

genome hit of precursorprecursor
sequence IDstartendstrandsequence folding
energy
miRNA*structure
SL2.40ch0131167523116834+ UCUCUCCAGUCACCUCAUCC
GUAUUUCUCGAAUAGGUUGC
UAAUUCAAGCAUUAGAGAAA
UAUGGAAGAGGUGAUUGGAG
AAA
-46.40NA structure