Tomato miRNA M00107

sequenceLengthmiRNA familysRNA IDtarget
AGGAAACUGUUUAGUCCAACC21NA S07357562 click here

Digital expression

SampleNo. raw readsRPM
IDOrganismCultivarTissue
S0735Solanum lycopersicumSunnyleaf , TSWV-infected20.15
S0708Solanum lycopersicumMicroTom flower, open10.31
S0373Solanum lycopersicumHeinz 1706fruit10.3
S0372Solanum lycopersicumHeinz 1706flower1431433.08
S0371Solanum lycopersicumHeinz 1706leaf10.3

Hits on known miRNAs

No hits on known miRNAs were found

Precursor of miRNA M00107

genome hit of precursorprecursor
sequence IDstartendstrandsequence folding
energy
miRNA*structure
SL2.40ch036179455961794734+ AGGAAACUGUUUAGUCCAAC
C
CAAGGUGGGGUAUUGGAAC
UGAUCUUUGCUGCUGAAUCA
UUGGCUCAUGAGCAUGUCAA
AGAAGAUGAUUGAACAUUCU
GGACAUGUUCUUGCUCCAAU
GAUGCAGGAGCUGAGCUCGG
UUUUUCACCGCCUUUUCUUG
GACUGAAGGGUUUCCU
-84.80NA structure