 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Tomato putative miRNAs
| miRNA ID | sequence | Length | miRNA family | target |
|---|---|---|---|---|
| M00001 | GACAGAAGAGAGUGAGCAC | 19 | miR156 | click here |
| M00002 | UGACAGAAGAGAGUGAGCA | 19 | miR156 | click here |
| M00003 | UGACAGAAGAGAGUGAGCGC | 20 | miR156 | click here |
| M00004 | CUGACAGAAGAGAGUGAGCA | 20 | miR156 | click here |
| M00005 | UGACAGAAGAGCGUGAGCAC | 20 | miR156 | click here |
| M00006 | CUGGCAGAAGAGAGUGAGCA | 20 | miR156 | click here |
| M00007 | UGACAGAAGAGAGUGAGCAC | 20 | miR156 | click here |
| M00008 | UGACAGAAGAGAGUGAGCACA | 21 | miR156 | click here |
| M00009 | GUGACAGAAGAGAGUGAGCAC | 21 | miR156 | click here |
| M00010 | CUGACAGAAGAGAGUGAGCAC | 21 | miR156 | click here |
| M00011 | UUGACAGAAGAUAGAGAGCACA | 22 | miR156 | click here |
| M00012 | UUGACAGAAGAUAGAGAGCACU | 22 | miR156 | click here |
| M00013 | UUGACAGAAGAUAGAGAGC | 19 | miR156/miR157 | click here |
| M00014 | UGACAGAAGAUAGAGAGCAC | 20 | miR156/miR157 | click here |
| M00015 | UUGACAGAAGAUAGAGAGCA | 20 | miR157/miR156 | click here |
| M00016 | UUGACAGAAGAUAGAGAGCAC | 21 | miR157/miR156 | click here |
| M00017 | UUUGGAUUGAAGGGAGCUC | 19 | miR159 | click here |
| M00018 | UUUGGAUUGAAGGGAGCUCU | 20 | miR159 | click here |
| M00019 | UUUGGAUUGAAGGGAGCUCUA | 21 | miR159 | click here |
| M00020 | GGAGGCAGCGGUUCAUCGAUC | 21 | miR162 | NA |
| M00021 | UCGAUAAACCUCUGCAUCCAG | 21 | miR162 | click here |
| M00022 | UGGAGAAGCAGGGCACGUG | 19 | miR164 | click here |
| M00023 | GGAGAAGCAGGGCACGUGCA | 20 | miR164 | click here |
| M00024 | UGGAGAAGCAGGGCACGUGC | 20 | miR164 | click here |
| M00025 | UGGAGAAGCAGGGCACGUGCA | 21 | miR164 | click here |
| M00026 | UGGAGAAGCAGGGCACGUGCAA | 22 | miR164 | click here |
| M00027 | GGACCAGGCUUCAUUCCUC | 19 | miR166 | click here |
| M00028 | GGACCAGGCUUCAUUCCCC | 19 | miR166 | click here |
| M00029 | UCGGACCAGGCUUCAUUCC | 19 | miR166 | click here |
| M00030 | UCGGACCAGGCUUCAUUCCC | 20 | miR166 | click here |
| M00031 | UUCGGACCAGGCUUCAUUCCC | 21 | miR166 | click here |
| M00032 | UCGGACCAGGCUUCAUUCCUC | 21 | miR166 | click here |
| M00033 | UCGGACCAGGCUUCAUUCCCC | 21 | miR166 | click here |
| M00034 | UUCGGACCAGGCUUCAUUCCCC | 22 | miR166 | click here |
| M00035 | UUUCGGACCAGGCUUCAUUCCC | 22 | miR166 | click here |
| M00036 | UGAAGCUGCCAGCAUGAUC | 19 | miR167 | click here |
| M00037 | UGAAGCUGCCAGCAUGAUCUA | 21 | miR167 | click here |
| M00038 | UGAAGCUGCCAGCAUGAUCUAA | 22 | miR167 | click here |
| M00039 | UCGCUUGGUGCAGGUCGGGAC | 21 | miR168 | click here |
| M00040 | UCGCUUGGUGCAGGUCGGGACC | 22 | miR168 | click here |
| M00041 | CAGCCAAGGAUGACUUGCCGA | 21 | miR169 | click here |
| M00042 | CAGCCAGGGAUGACUUGCCGA | 21 | miR169 | NA |
| M00043 | UGAUUGAGCCGUGCCAAUAUC | 21 | miR171 | click here |
| M00044 | GGAAUCUUGAUGAUGCUGCAG | 21 | miR172 | click here |
| M00045 | AGAAUCUUGAUGAUGCUGCAG | 21 | miR172 | click here |
| M00046 | AGAAUCUUGAUGAUGCUGCAU | 21 | miR172 | click here |
| M00047 | ACGAGAGUCAUCUGUGACAGG | 21 | miR1919 | NA |
| M00048 | UUGGACUGAAGGGAGCUCCC | 20 | miR319 | click here |
| M00049 | UGGACUGAAGGGAGCUCCCU | 20 | miR319 | click here |
| M00050 | CUUGGACUGAAGGGAGCUCCC | 21 | miR319 | click here |
| M00051 | UUGGACUGAAGGGAGCUCCUU | 21 | miR319 | click here |
| M00052 | UUGGACUGAAGGGAGCUCCCU | 21 | miR319 | click here |
| M00053 | CUUGGACUGAAGGGAGCUCCCU | 22 | miR319 | NA |
| M00054 | AAGCUCAGGAGGGAUAGCGCC | 21 | miR390 | click here |
| M00055 | UUCCACAGCUUUCUUGAAC | 19 | miR396 | click here |
| M00056 | GUUCAAUAAAGCUGUGGGAA | 20 | miR396 | click here |
| M00057 | UUCAAUAAAGCUGUGGGAAG | 20 | miR396 | click here |
| M00058 | UCCACAGCUUUCUUGAACUG | 20 | miR396 | click here |
| M00059 | UUCCACAGCUUUCUUGAACU | 20 | miR396 | click here |
| M00060 | GUCCAAGAAAGCUGUGGGAAA | 21 | miR396 | click here |
| M00061 | UUCCACAGCUUUCUUGAACUU | 21 | miR396 | click here |
| M00062 | GUUCAAUAAAGCUGUGGGAAG | 21 | miR396 | click here |
| M00063 | UUCCACAGCUUUCUUGAACUG | 21 | miR396 | click here |
| M00064 | UUCCACAGCUUUCUUGAACUUC | 22 | miR396 | click here |
| M00065 | UACGCAGGAGAGAUGAUGCUG | 21 | miR4376 | NA |
| M00066 | UACGCAGGAGAGAUGAUGCUGG | 22 | miR4376 | NA |
| M00067 | ACGCAGGAGAGAUGAUGCUGGA | 22 | miR4376 | NA |
| M00068 | UGUGAAUGAUGCGGGAGAUAA | 21 | miR4414 | click here |
| M00069 | UCUUUCCUACUCCUCCCAUACC | 22 | miR482 | click here |
| M00070 | UGUGGGUGGGGUGGAAAGAUU | 21 | miR5301 | click here |
| M00071 | UGGAAGGGAGAAUAUCCAGGA | 21 | miR6022 | click here |
| M00072 | UUUAGCAAGAGUUGUUUUACC | 21 | miR6024 | click here |
| M00073 | UUUUAGCAAGAGUUGUUUUACC | 22 | miR6024 | click here |
| M00074 | UUCUUGGCUAGAGUUGUAUUGC | 22 | miR6026 | click here |
| M00075 | UGAAUCCUUCGGCUAUCCAUA | 21 | miR6027 | click here |
| M00076 | UGAAUCCUUCGGCUAUCCAUAA | 22 | miR6027 | click here |
| M00077 | GUGCGAGGGGGCGACGCGA | 19 | NA | NA |
| M00078 | UUGGCUGAGUGAGCAUCAC | 19 | NA | click here |
| M00079 | UGUCGCAGAUGACUUUCGC | 19 | NA | click here |
| M00080 | AGUGGACAAGUAAAAGUGAA | 20 | NA | click here |
| M00081 | UUGGCUGAGUGAGCAUCACG | 20 | NA | click here |
| M00082 | CGGAGAGUAGAAGGCAAGAG | 20 | NA | click here |
| M00083 | UGUCGCAGAUGACUUUCGCC | 20 | NA | click here |
| M00084 | AGGGAUUGUAGGCAGAGAGA | 20 | NA | click here |
| M00085 | UUUGGCUCAUGGAUUUUAGC | 20 | NA | click here |
| M00086 | AGAAACAACACUUGCUAAAGG | 21 | NA | click here |
| M00087 | CUUGGAACCACAGUUACCACC | 21 | NA | click here |
| M00088 | UCACUGUGUGAGAUGGUAAUA | 21 | NA | click here |
| M00089 | GGGGCAACUUGAGAUCACAUG | 21 | NA | NA |
| M00090 | CGUUGAAUAUAUCUCAUAAUG | 21 | NA | NA |
| M00091 | GAGGUGCUCACUCAGCUAAUA | 21 | NA | NA |
| M00092 | CAUGGCAGGAAGACAUGAGGC | 21 | NA | NA |
| M00093 | AUAAUGCUUGGAAUAUGCCCU | 21 | NA | click here |
| M00094 | AACGGUGAUAAUGGUAUUCUA | 21 | NA | click here |
| M00095 | UGGAAGAGGUGAUUGGAGAAA | 21 | NA | click here |
| M00096 | AUAUUGGUGCGGUUCAAUUAG | 21 | NA | click here |
| M00097 | AUAAAGCUGUGGGAAGAUACA | 21 | NA | NA |
| M00098 | CAGGUGCUCACUCAGCUAAUA | 21 | NA | NA |
| M00099 | UGAUGUACAUGGGAUGGAUUA | 21 | NA | NA |
| M00100 | AUGGCAGGAAGACAUGAGGCA | 21 | NA | click here |
| M00101 | CGGUUCAAUAAAGCUGUGGGA | 21 | NA | NA |
| M00102 | ACGGUGAUAAUGGUAUUCUAA | 21 | NA | NA |
| M00103 | GGCAUAUGUCAAGUAUUAUGG | 21 | NA | click here |
| M00104 | UAGAUGUGCAUACUCAAAGUU | 21 | NA | click here |
| M00105 | CUAUGAGAUAAGUUCAACGUG | 21 | NA | click here |
| M00106 | UUCACUGUGUGAGAUGGUAAU | 21 | NA | click here |
| M00107 | AGGAAACUGUUUAGUCCAACC | 21 | NA | click here |
| M00108 | UGUGAGAUGGUAAUAACGGUG | 21 | NA | click here |
| M00109 | UUUUCAGUAGACGUUGUGAAU | 21 | NA | click here |
| M00110 | UCUUGGAUUUUAUCGGAGUUA | 21 | NA | click here |
| M00111 | UUUCAGUAGACGUUGUGAAUA | 21 | NA | click here |
| M00112 | UGAGAUGGUAAUAACGGUGAU | 21 | NA | NA |
| M00113 | UUGGCUGAGUGAGCAUCACUG | 21 | NA | click here |
| M00114 | UGUCGCAGAUGACUUUCGCCC | 21 | NA | click here |
| M00115 | UUGGCUGAGUGAGCAUCACGG | 21 | NA | click here |
| M00116 | AGUUGACGGCGUUAGAUUGAUA | 22 | NA | click here |
| M00117 | UGAACCUGCAUCGUGAUGGCCU | 22 | NA | NA |
| M00118 | UAGCCUGAACCUGCAUCGUGAU | 22 | NA | NA |
| M00119 | AGUGGACUAGAAAAUGUGCAUU | 22 | NA | click here |
| M00120 | UCUUGGAUUUUAUCGGAGUUAA | 22 | NA | click here |
| M00121 | AUUUUUUGGCAUAGUUUUGAAC | 22 | NA | click here |
| M00122 | CGGUGACAGAAGAGAGUGAGCA | 22 | NA | click here |
| M00123 | UCACUGUGUGAGAUGGUAAUAA | 22 | NA | click here |
| M00124 | AAUACAACUAUAGCCAAGACAA | 22 | NA | click here |
| M00125 | UUCACUGUGUGAGAUGGUAAUA | 22 | NA | click here |
| M00126 | AUGGGUAGCACAAGGAUUAAUG | 22 | NA | click here |
| M00127 | UAACUUCGUCUAGCUCGCCUUC | 22 | NA | NA |
| M00128 | UGGCAGGAAGACAUGAGGCAUU | 22 | NA | NA |
| M00129 | UCUCAGUCGGAAGAGGGGGAAG | 22 | NA | NA |
| M00130 | CCGACUGAGAAUUGCAAAGGUA | 22 | NA | NA |
| M00131 | UGGUAUAUGACCUUGCAAUUCA | 22 | NA | click here |
| M00132 | UUUUCAGUAGACGUUGUGAAUA | 22 | NA | NA |
| M00133 | UUACUACGGUCAGGAAUCUUAU | 22 | NA | NA |
| M00134 | AGGGAUUGUAGGCAGAGAGAUG | 22 | NA | click here |
| M00135 | AAGGAAGAACAAUAGAGAGUACU | 23 | NA | NA |
| M00136 | AUGAUCAUUAGCGGCAUUUAAUU | 23 | NA | click here |
| M00137 | AAAGUGAGACGAACAAAUUGAAU | 23 | NA | click here |
| M00138 | UUGGCUGAGUGAGCAUCACGGAA | 23 | NA | NA |
| M00139 | GGGAUUGUAGGCAGAGAGAUGGC | 23 | NA | NA |
| M00140 | GCUGACGGCAUUAGAUUGAUAUA | 23 | NA | NA |
| M00141 | UGGACGGCGAGGACAUGAGUGAA | 23 | NA | NA |
| M00142 | GGCAGAGACAAUACCUGAAUAUG | 23 | NA | NA |
| M00143 | AUGGCAGAGACAAUACCUGAGUA | 23 | NA | NA |
| M00144 | AAGCUGACGGCGUUAGAUUGAUA | 23 | NA | NA |
| M00145 | UGAACCUGCAUCGUGAUGGCCUG | 23 | NA | NA |
| M00146 | UGUGGGGAAGAAGGGCAUUUUGG | 23 | NA | click here |
| M00147 | GCUGACGGCGUUAGAUUGAUAUA | 23 | NA | NA |
| M00148 | UUCGGACAUAGGUUGAGAGGGUA | 23 | NA | click here |
| M00149 | AUGGCAGAGACAAUACCUGAAUA | 23 | NA | click here |
| M00150 | AAGUUGACGGCGUUAGAUUGAUA | 23 | NA | click here |
| M00151 | GUUGACGGCGUUAGAUUGAUAUA | 23 | NA | NA |
| M00152 | AGGGAUUGUAGGCAGAGAGAUGG | 23 | NA | click here |
| M00153 | UUGAAUGUUGGGGAACGAACGUCU | 24 | NA | NA |
| M00154 | AUAAAAUUGAACAAUUAGACGGAC | 24 | NA | NA |
| M00155 | AGAGACGGACUUAUACUAUACUAA | 24 | NA | click here |
| M00156 | AGGUGUCUAGAUGUGCAUACUCAA | 24 | NA | NA |
| M00157 | CAUGGCAGAGACAAUACCUGAAUA | 24 | NA | NA |
| M00158 | AGAGGACGGUCUGAGAGAGUUUUA | 24 | NA | NA |
| M00159 | AGUUGACGGCGUUAAAUUGAUAUA | 24 | NA | NA |
| M00160 | GUUGACGGCGUUAGAUUGAUAUAC | 24 | NA | NA |
| M00161 | ACAAGCAAAUUGAAACGGACUGGA | 24 | NA | click here |
| M00162 | ACAUGGCAGGAAGACAUGAGGCAU | 24 | NA | NA |
| M00163 | AAGAUAGACUUGUUUGACUCUUGA | 24 | NA | NA |
| M00164 | AGAGACACACUUAUACUAUACUCA | 24 | NA | click here |
| M00165 | AAGCUGACGGCAUUAGAUUGAUAU | 24 | NA | NA |
| M00166 | ACAUGGACAAGUAAAUAGGGACGG | 24 | NA | NA |
| M00167 | UGGGCAGCGAACCGGAACUACGAG | 24 | NA | NA |
| M00168 | ACGUCCCUUCCCCAUCGUUCAACA | 24 | NA | NA |
| M00169 | AGGCGCAUGUGUCAUAUCUUUACA | 24 | NA | click here |
| M00170 | AUAUGACGGCAGGAACAUCAAUGU | 24 | NA | NA |
| M00171 | CAUGGCAGGAAGACAUGAGGCAUU | 24 | NA | NA |
| M00172 | UUUAAUUGAAUGCCAAGUGUGUGG | 24 | NA | NA |
| M00173 | AGAGACAAUACCUGAAUAUGUGAA | 24 | NA | NA |
| M00174 | UGGACGGCGAGGACAUGAGUGAAC | 24 | NA | NA |
| M00175 | AGAGACGCACUUAUACUAUACUAA | 24 | NA | click here |
| M00176 | AUGGCAGAGACAAUACCUGAGUAU | 24 | NA | NA |
| M00177 | AGAAUAGUUGGCUCAUUAGGUUAA | 24 | NA | NA |
| M00178 | AAAAGCUGACGGCGUUAGAUUGAU | 24 | NA | NA |
| M00179 | UUGGCAUAAGUUUGUGAAAGCCGG | 24 | NA | NA |
| M00180 | AGCUGACGGCAUUAGAUUGAUAUA | 24 | NA | NA |
| M00181 | AGUGAAGGGCAUAUAUACUCUAGU | 24 | NA | NA |
| M00182 | AGACAAGCAAAUUGAAACGGACUG | 24 | NA | NA |
| M00183 | AAAGCUGACGGCGUUAGAUUGAUA | 24 | NA | NA |
| M00184 | GAUAGUACAGGUAGGAAACUCACA | 24 | NA | NA |
| M00185 | AACAACAUACUUACUGAAAUGCCA | 24 | NA | click here |
| M00186 | AAGUUGACGGCGUUAGAUUGAUAU | 24 | NA | NA |
| M00187 | AAAAUGAUCAUUAGCGGCAUUUAA | 24 | NA | click here |
| M00188 | UUUCGGACAUAGGUUGAGAGGGUA | 24 | NA | click here |
| M00189 | AAGGGAUUGUAGGCAGAGAGAUGG | 24 | NA | NA |
| M00190 | UGUGGGGAAGAAGGGCAUUUUGGA | 24 | NA | NA |
| M00191 | ACAUGUGGGACCAGCGCGGAGUGA | 24 | NA | NA |
| M00192 | AAGCUGACGGCGUUAGAUUGAUAU | 24 | NA | NA |
| M00193 | AGUUGACGGCGUUAGAUUGAUACA | 24 | NA | NA |
| M00194 | AAAGUUGACGGCGUUAGAUUGAUA | 24 | NA | NA |
| M00195 | AGGAAGACAUGAGGCAUUAGUAUG | 24 | NA | NA |
| M00196 | UUUGGACGGCAUGAACACUAAUGU | 24 | NA | NA |
| M00197 | AUGGCAGAGACAAUACCUGAAUAU | 24 | NA | NA |
| M00198 | AAAGUGAGACGAACAAAUUGAAUC | 24 | NA | click here |
| M00199 | AGCUGACGGCGUUAGAUUGAUAUA | 24 | NA | NA |
| M00200 | AGUUGACGGCGUUAGAUUGAUAUA | 24 | NA | NA |
| M00201 | AGAGGCGGAGUCAGAAUUUUCAAU | 24 | NA | NA |
| M00202 | AGGGAUUGUAGGCAGAGAGAUGGC | 24 | NA | NA |