Tomato Functional Genomics Database (TFGD)

Tomato sRNA S23003513

Sequence	Length	annotation
UGAAGCUGCCAGCAUGAUC	19	miRNA

expression

Sample				No. raw reads	RPM
ID	Organism	Cultivar	Tissue	No. raw reads	RPM
S0739	Solanum lycopersicum	Ailsa Craig	fruit, red ripe (52 days after anthesis)	1	0.1
S0738	Solanum lycopersicum	Ailsa Craig	fruit, breaker (42 days after anthesis)	1	0.13
S0735	Solanum lycopersicum	Sunny	leaf , TSWV-infected	241	17.78
S0734	Solanum lycopersicum	IL8-3-1	seedlings, two-week-old	164	126.38
S0733	Solanum lycopersicum	IL8-3	seedlings, two-week-old	151	114.55
S0732	Solanum lycopersicum	IL8-2-1	seedlings, two-week-old	174	123.96
S0731	Solanum lycopersicum	IL8-2	seedlings, two-week-old	105	77.33
S0730	Solanum lycopersicum	IL8-1-3	seedlings, two-week-old	148	92.41
S0729	Solanum lycopersicum	IL8-1D	seedlings, two-week-old	134	85.36
S0728	Solanum lycopersicum	IL8-1-1	seedlings, two-week-old	104	68.54
S0727	Solanum lycopersicum	IL2-5	seedlings, two-week-old	55	33.62
S0726	Solanum lycopersicum	IL1-1	seedlings, two-week-old	85	50.88
S0725	Solanum lycopersicum x S. pennellii	M82 x LA716 (F2)	seedlings, two-week-old , replicate3	1252	1221.58
S0724	Solanum lycopersicum x S. pennellii	M82 x LA716 (F2)	seedlings, two-week-old , replicate2	992	579.1
S0723	Solanum lycopersicum x S. pennellii	M82 x LA716 (F2)	seedlings, two-week-old , replicate1	989	970.15
S0722	Solanum lycopersicum x S. pennellii	M82 x LA716 (F1)	seedlings, two-week-old , replicate2	1232	871.31
S0721	Solanum lycopersicum x S. pennellii	M82 x LA716 (F1)	seedlings, two-week-old , replicate1	80	87.09
S0720	Solanum pennellii	LA716	seedlings, two-week-old , replicate2	107	102.23
S0719	Solanum pennellii	LA716	seedlings, two-week-old , replicate1	81	233.99
S0718	Solanum lycopersicum	M82	seedlings, two-week-old , replicate2	58	40.41
S0717	Solanum lycopersicum	M82	seedlings, two-week-old , replicate1	38	50.71
S0714	Solanum lycopersicum	MicroTom	fruit , 3 days post breaker	5	1.26
S0712	Solanum lycopersicum	MicroTom	fruit , mature green	7	1.79
S0711	Solanum lycopersicum	MicroTom	fruit , 11mm to 14mm in diameter	4	1.93
S0710	Solanum lycopersicum	MicroTom	fruit , 5mm to 7mm in diameter	4	3.32
S0709	Solanum lycopersicum	MicroTom	fruit , 1mm to 3mm in diameter	8	4.54
S0708	Solanum lycopersicum	MicroTom	flower, open	31	9.56
S0707	Solanum lycopersicum	MicroTom	flower bud, closed bud before flower blooming	43	11.29
S0372	Solanum lycopersicum	Heinz 1706	flower	111	33.59
S0371	Solanum lycopersicum	Heinz 1706	leaf	79	23.81