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Transcriptome sequencing of tomato leaves treated with different bacteria and PAMPs

Samples

IDorganismgenotypedescription
S0620 tomatoRio Grande prf3 (deletion in Prf)mock PAMPs 30 min
S0621 tomatoRio Grande prf3 (deletion in Prf)cold shock protein 22 (csp22) 30 min
S0622 tomatoRio Grande prf3 (deletion in Prf)flagellin 22 (flg22) 30 min
S0623 tomatoRio Grande prf3 (deletion in Prf)flagellin II-28 (flgII-28) 30 min
S0624 tomatoRio Grande prf3 (deletion in Prf)Lipopolysaccharides (LPS) 30 min
S0625 tomatoRio Grande prf3 (deletion in Prf)Peptidoglycan (PGN) 30 min
S0626 tomatoRio Grande prf3 (deletion in Prf)mock PAMPs 6h
S0627 tomatoRio Grande prf3 (deletion in Prf)cold shock protein 22 (csp22) 6 h
S0628 tomatoRio Grande prf3 (deletion in Prf)flagellin 22 (flg22) 6h
S0629 tomatoRio Grande prf3 (deletion in Prf)flagellin II-28 (flgII-28) 6h
S0630 tomatoRio Grande prf3 (deletion in Prf)Lipopolysaccharides (LPS) 6 h
S0631 tomatoRio Grande prf3 (deletion in Prf)Peptidoglycan (PGN) 6h
S0632 tomatoRio Grande prf3 (deletion in Prf)mock bacteria 30 min
S0633 tomatoRio Grande prf3 (deletion in Prf)DC3000 30 min
S0634 tomatoRio Grande prf3 (deletion in Prf)DC3000ΔhrcQ-U 30 min
S0635 tomatoRio Grande prf3 (deletion in Prf)DC3000ΔhrcQ-UΔfliC 30 min
S0636 tomatoRio Grande prf3 (deletion in Prf)DC3000Δ28 30 min
S0637 tomatoRio Grande prf3 (deletion in Prf)DC3000ΔAvrPtoΔAvrPtoB 30 min
S0638 tomatoRio Grande prf3 (deletion in Prf)Pseudomonas fluorescens 30 min
S0639 tomatoRio Grande prf3 (deletion in Prf)Pseudomonas putida 30 min
S0640 tomatoRio Grande prf3 (deletion in Prf)Agrobacterium tumefaciens 30 min
S0641 tomatoRio Grande prf3 (deletion in Prf)mock bacteria 6 h
S0642 tomatoRio Grande prf3 (deletion in Prf)DC3000 6 h
S0643 tomatoRio Grande prf3 (deletion in Prf)DC3000ΔhrcQ-U 6 h
S0644 tomatoRio Grande prf3 (deletion in Prf)DC3000ΔhrcQ-UΔfliC 6 h
S0645 tomatoRio Grande prf3 (deletion in Prf)DC3000Δ28 6 h
S0646 tomatoRio Grande prf3 (deletion in Prf)DC3000ΔAvrPtoΔAvrPtoB 6 h
S0647 tomatoRio Grande prf3 (deletion in Prf)Pseudomonas fluorescens 6 h
S0648 tomatoRio Grande prf3 (deletion in Prf)Pseudomonas putida 6 h
S0649 tomatoRio Grande prf3 (deletion in Prf)Agrobacterium tumefaciens 6 h