Tomato wild type, vector control and transgenic lines expressing InsP 5-ptase: mature fruits, root tips, and leaves
Hybridization: WT (fruit)
|
|
Hybridization protocol
|
| Hybridization solution | N/A |
|---|
| Solution concentration | N/A |
|---|
| Blocking agent | N/A |
|---|
| Wash procedure | GeneChips were washed and stained in the Affymetrix Fluidics Station 400 |
|---|
| Labeled Target Quantity | 10 ug of cRNA |
|---|
| Hybridization Time | 16 hr |
|---|
| Hybridization Volume | N/A |
|---|
| Hybridization Temperature | 45C |
|---|
| Hybridization Instrument | N/A |
|---|
|
|
Scan information
|
| Scan hardware | Affymetrix GeneChip Scanner 3000 7G |
|---|
| Scan software | Affymetrix GeneChip Command Console software |
|---|
|
|
Image analysis information
|
| Software | Affymetrix GeneChip Operating Software (GCOS) |
|---|
| Analysis algorithm | MAS 5 software |
|---|
|
|
Normalization information
|
| Normalization software | RMA |
|---|
| Normalization algorithm | N/A |
|---|
| Normalization strategy | Total array |
|---|
|