TFGD
Home Expression Metabolite sRNA Links Contact

Tomato sRNA S06434920

SequenceLengthannotation
AGAGACAAUACCUGAAUAUGUGAA24miRNA

expression

SampleNo. raw readsRPM
IDOrganismCultivarTissue
S0739 Solanum lycopersicum Ailsa Craig fruit, red ripe (52 days after anthesis) 4 0.39
S0738 Solanum lycopersicum Ailsa Craig fruit, breaker (42 days after anthesis) 3 0.4
S0737 Solanum lycopersicum Ailsa Craig fruit, mature green (39 days after anthesis) 1 0.12
S0735 Solanum lycopersicum Sunny leaf , TSWV-infected 88 6.49
S0734 Solanum lycopersicum IL8-3-1 seedlings, two-week-old 7 5.39
S0733 Solanum lycopersicum IL8-3 seedlings, two-week-old 15 11.38
S0732 Solanum lycopersicum IL8-2-1 seedlings, two-week-old 7 4.99
S0731 Solanum lycopersicum IL8-2 seedlings, two-week-old 2 1.47
S0730 Solanum lycopersicum IL8-1-3 seedlings, two-week-old 10 6.24
S0729 Solanum lycopersicum IL8-1D seedlings, two-week-old 11 7.01
S0728 Solanum lycopersicum IL8-1-1 seedlings, two-week-old 4 2.64
S0727 Solanum lycopersicum IL2-5 seedlings, two-week-old 1 0.61
S0726 Solanum lycopersicum IL1-1 seedlings, two-week-old 2 1.2
S0725 Solanum lycopersicum x S. pennellii M82 x LA716 (F2) seedlings, two-week-old , replicate3 61 59.52
S0724 Solanum lycopersicum x S. pennellii M82 x LA716 (F2) seedlings, two-week-old , replicate2 91 53.12
S0723 Solanum lycopersicum x S. pennellii M82 x LA716 (F2) seedlings, two-week-old , replicate1 136 133.41
S0722 Solanum lycopersicum x S. pennellii M82 x LA716 (F1) seedlings, two-week-old , replicate2 31 21.92
S0721 Solanum lycopersicum x S. pennellii M82 x LA716 (F1) seedlings, two-week-old , replicate1 65 70.76
S0720 Solanum pennellii LA716 seedlings, two-week-old , replicate2 188 179.63
S0719 Solanum pennellii LA716 seedlings, two-week-old , replicate1 36 103.99
S0718 Solanum lycopersicum M82 seedlings, two-week-old , replicate2 15 10.45
S0717 Solanum lycopersicum M82 seedlings, two-week-old , replicate1 3 4
S0716 Solanum lycopersicum MicroTom fruit , 7 days post breaker 8 3.35
S0714 Solanum lycopersicum MicroTom fruit , 3 days post breaker 21 5.29
S0713 Solanum lycopersicum MicroTom fruit , breaker stage 13 3.68
S0712 Solanum lycopersicum MicroTom fruit , mature green 32 8.19
S0711 Solanum lycopersicum MicroTom fruit , 11mm to 14mm in diameter 9 4.34
S0710 Solanum lycopersicum MicroTom fruit , 5mm to 7mm in diameter 6 4.98
S0709 Solanum lycopersicum MicroTom fruit , 1mm to 3mm in diameter 15 8.51
S0708 Solanum lycopersicum MicroTom flower, open 47 14.5
S0707 Solanum lycopersicum MicroTom flower bud, closed bud before flower blooming 27 7.09
S0373 Solanum lycopersicum Heinz 1706 fruit 24 7.18
S0372 Solanum lycopersicum Heinz 1706 flower 29 8.78
S0371 Solanum lycopersicum Heinz 1706 leaf 18 5.42

S06434920 mapped to the following genes

gene IDstart positionstop positionstrandexpression
Solyc05g031610 6 29 + click here