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Tomato sRNA S24047117

SequenceLengthannotation
UGUCGCAGAUGACUUUCGC19miRNA

expression

SampleNo. raw readsRPM
IDOrganismCultivarTissue
S0739 Solanum lycopersicum Ailsa Craig fruit, red ripe (52 days after anthesis) 4 0.39
S0738 Solanum lycopersicum Ailsa Craig fruit, breaker (42 days after anthesis) 5 0.66
S0737 Solanum lycopersicum Ailsa Craig fruit, mature green (39 days after anthesis) 2 0.23
S0735 Solanum lycopersicum Sunny leaf , TSWV-infected 7 0.52
S0734 Solanum lycopersicum IL8-3-1 seedlings, two-week-old 72 55.48
S0733 Solanum lycopersicum IL8-3 seedlings, two-week-old 61 46.27
S0732 Solanum lycopersicum IL8-2-1 seedlings, two-week-old 51 36.33
S0731 Solanum lycopersicum IL8-2 seedlings, two-week-old 60 44.19
S0730 Solanum lycopersicum IL8-1-3 seedlings, two-week-old 63 39.34
S0729 Solanum lycopersicum IL8-1D seedlings, two-week-old 83 52.87
S0728 Solanum lycopersicum IL8-1-1 seedlings, two-week-old 55 36.25
S0727 Solanum lycopersicum IL2-5 seedlings, two-week-old 46 28.12
S0726 Solanum lycopersicum IL1-1 seedlings, two-week-old 62 37.11
S0725 Solanum lycopersicum x S. pennellii M82 x LA716 (F2) seedlings, two-week-old , replicate3 252 245.88
S0724 Solanum lycopersicum x S. pennellii M82 x LA716 (F2) seedlings, two-week-old , replicate2 373 217.75
S0723 Solanum lycopersicum x S. pennellii M82 x LA716 (F2) seedlings, two-week-old , replicate1 211 206.98
S0722 Solanum lycopersicum x S. pennellii M82 x LA716 (F1) seedlings, two-week-old , replicate2 478 338.06
S0721 Solanum lycopersicum x S. pennellii M82 x LA716 (F1) seedlings, two-week-old , replicate1 110 119.75
S0720 Solanum pennellii LA716 seedlings, two-week-old , replicate2 142 135.67
S0719 Solanum pennellii LA716 seedlings, two-week-old , replicate1 32 92.44
S0718 Solanum lycopersicum M82 seedlings, two-week-old , replicate2 55 38.32
S0717 Solanum lycopersicum M82 seedlings, two-week-old , replicate1 7 9.34
S0716 Solanum lycopersicum MicroTom fruit , 7 days post breaker 1 0.42
S0714 Solanum lycopersicum MicroTom fruit , 3 days post breaker 18 4.53
S0713 Solanum lycopersicum MicroTom fruit , breaker stage 2 0.57
S0712 Solanum lycopersicum MicroTom fruit , mature green 22 5.63
S0711 Solanum lycopersicum MicroTom fruit , 11mm to 14mm in diameter 54 26.01
S0710 Solanum lycopersicum MicroTom fruit , 5mm to 7mm in diameter 8 6.65
S0709 Solanum lycopersicum MicroTom fruit , 1mm to 3mm in diameter 8 4.54
S0708 Solanum lycopersicum MicroTom flower, open 11 3.39
S0707 Solanum lycopersicum MicroTom flower bud, closed bud before flower blooming 31 8.14
S0373 Solanum lycopersicum Heinz 1706 fruit 2 0.6
S0372 Solanum lycopersicum Heinz 1706 flower 3 0.91
S0371 Solanum lycopersicum Heinz 1706 leaf 9 2.71

S24047117 mapped to the following genes

gene IDstart positionstop positionstrandexpression
Solyc08g067560 283 301 - click here
Solyc08g067580 274 292 - click here